RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 FAM117AQ9C073 453 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 MYNNQ9NPC7 610 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 PRDM9Q9NQV7 894 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 SEMA3GQ9NS98 782 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 SIRT5Q9NXA8 310 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 FAM53CQ9NYF3 392 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 BAIAP2L1Q9UHR4 511 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 MMACHCQ9Y4U1 282 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 CHD8Q9HCK8 2581 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 FREM2Q5SZK8 3169 aa14.08□□□□□ -0.16
NUP54-213ENST00000513352 BLACEA4D250 179 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 ZNF891A8MT65 544 aaPredicted RBP14.07□□□□□ -0.16
NUP54-213ENST00000513352 ZNF195O14628 629 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 LDB3O75112 727 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 ALOX12BO75342 701 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 LRATO95237 230 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 IGHEP01854 428 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 C8orf89P0DMQ9 161 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 ALOX15P16050 662 aaPredicted RBP14.07□□□□□ -0.16
NUP54-213ENST00000513352 WT1P19544 449 aaPredicted RBP14.07□□□□□ -0.16
NUP54-213ENST00000513352 TACR1P25103 407 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 ITPKBP27987 946 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 LSP1P33241 339 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 GSTM5P46439 218 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 MC1RQ01726 317 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 RHAGQ02094 409 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 EMX2Q04743 252 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 ACTN3Q08043 901 aaPredicted RBP14.07□□□□□ -0.16
NUP54-213ENST00000513352 STX4Q12846 297 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 SSPNQ14714 243 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 HEPACAMQ14CZ8 416 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 NSDHLQ15738 373 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 ATP1A1-AS1Q5TC04 95 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 OR52E8Q6IFG1 317 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 CCDC81Q6ZN84 652 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 QSOX2Q6ZRP7 698 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 LANCL3Q6ZV70 420 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 LARP4Q71RC2 724 aaKnown RBP eCLIP14.07□□□□□ -0.16
NUP54-213ENST00000513352 OR4N5Q8IXE1 308 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 CEP70Q8NHQ1 597 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 TSLPQ969D9 159 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 UCN3Q969E3 161 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 C11orf24Q96F05 449 aaPredicted RBP14.07□□□□□ -0.16
NUP54-213ENST00000513352 MARK4Q96L34 752 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 FCRL1Q96LA6 429 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 RILPQ96NA2 401 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 OR52B2Q96RD2 323 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 NSRP1Q9H0G5 558 aaKnown RBP14.07□□□□□ -0.16
NUP54-213ENST00000513352 TCF7L2Q9NQB0 619 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 MIEF1Q9NQG6 463 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 PCDHA9Q9Y5H5 950 aa14.07□□□□□ -0.16
NUP54-213ENST00000513352 C1orf226A1L170 272 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 E9PBE3 544 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 TAF4O00268 1085 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 PGRMC2O15173 223 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 EFSO43281 561 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 KLHL41O60662 606 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 ERAL1O75616 437 aaKnown RBP14.06□□□□□ -0.16
NUP54-213ENST00000513352 RECKO95980 971 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 IFNA16P05015 189 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 PRR35P0CG20 571 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 PRPS2P11908 318 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 PIK3R1P27986 724 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 PPP2R1BP30154 601 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 HPCAL1P37235 193 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 ASMTP46597 345 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 SEC24CP53992 1094 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 HSD17B7P56937 341 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 FOLH1Q04609 750 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 TLE3Q04726 772 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 EEF1A2Q05639 463 aaKnown RBP14.06□□□□□ -0.16
NUP54-213ENST00000513352 RPS6KA2Q15349 733 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 SMU1Q2TAY7 513 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 LSM12Q3MHD2 195 aaKnown RBP14.06□□□□□ -0.16
NUP54-213ENST00000513352 IKBIPQ70UQ0 350 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 SPATA19Q7Z5L4 167 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 ACTRT2Q8TDY3 377 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 TANKQ92844 425 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 EXOSC8Q96B26 276 aaKnown RBP14.06□□□□□ -0.16
NUP54-213ENST00000513352 C8orf44Q96CB5 159 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 KLHL29Q96CT2 875 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 EGLN2Q96KS0 407 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 ZNF317Q96PQ6 595 aaPredicted RBP14.06□□□□□ -0.16
NUP54-213ENST00000513352 EBF4Q9BQW3 602 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 NECTIN3Q9NQS3 549 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 C5AR2Q9P296 337 aa14.06□□□□□ -0.16
NUP54-213ENST00000513352 C19orf25Q9UFG5 118 aaPredicted RBP14.06□□□□□ -0.16
NUP54-213ENST00000513352 WASHC1A8K0Z3 465 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 A8MUA0 341 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 PEX12O00623 359 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 UBDO15205 165 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 NKX2-8O15522 239 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 FGF17O60258 216 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 CTNSO60931 367 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 G6PDP11413 515 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 DRD2P14416 443 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 ACPPP15309 386 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 MMP11P24347 488 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 EFNA3P52797 238 aa14.05□□□□□ -0.16
NUP54-213ENST00000513352 DIO3P55073 304 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms