RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CHIT1Q13231 466 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 ZNF793Q6ZN11 406 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 CYS1Q717R9 158 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 ZNF321PQ8N8H1 164 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 ACOT4Q8N9L9 421 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 OR5M3Q8NGP4 307 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 SREK1Q8WXA9 508 aaKnown RBP21.09■□□□□ 0.97
USP42-205ENST00000465073 UBE2E3Q969T4 207 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 MAPKAP1Q9BPZ7 522 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 MS4A8Q9BY19 250 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 PNPLA3Q9NST1 481 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 ZNF407Q9C0G0 2248 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 AKAP9Q99996 3911 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 A0A1B0GVC2 190 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 G3V3Y1 287 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 CCNT2O60583 730 aaKnown RBP21.08■□□□□ 0.97
USP42-205ENST00000465073 LDB3O75112 727 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 S100BP04271 92 aaPredicted RBP21.08■□□□□ 0.97
USP42-205ENST00000465073 ACVR2AP27037 513 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 SSTR1P30872 391 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 MSH2P43246 934 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 GNG11P61952 73 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 LRRC70Q7Z2Q7 622 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 DMRTC2Q8IXT2 367 aaPredicted RBP21.08■□□□□ 0.97
USP42-205ENST00000465073 FAM109AQ8N4B1 249 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 ZNF473Q8WTR7 871 aaKnown RBP21.08■□□□□ 0.97
USP42-205ENST00000465073 UBXN10Q96LJ8 280 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 SMC6Q96SB8 1091 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 RBBP8Q99708 897 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 CD244Q9BZW8 370 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 SACM1LQ9NTJ5 587 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 COPS7AQ9UBW8 275 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 RNF112Q9ULX5 631 aa21.08■□□□□ 0.97
USP42-205ENST00000465073 FIGNL2A6NMB9 653 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 HIST1H1TP22492 207 aaPredicted RBP21.07■□□□□ 0.96
USP42-205ENST00000465073 GP5P40197 560 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 E2F2Q14209 437 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 MPEG1Q2M385 716 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 HYAL4Q2M3T9 481 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 AP5B1Q2VPB7 878 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 FAM47EQ6ZV65 393 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 CHSY3Q70JA7 882 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 TRILQ7L0X0 811 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 TMEM251Q8N6I4 163 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 OR5M9Q8NGP3 310 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 ANKRD9Q96BM1 317 aaPredicted RBP21.07■□□□□ 0.96
USP42-205ENST00000465073 NAPGQ99747 312 aaPredicted RBP21.07■□□□□ 0.96
USP42-205ENST00000465073 KCNF1Q9H3M0 494 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 SLC24A3Q9HC58 644 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 PRM3Q9NNZ6 103 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 RNF14Q9UBS8 474 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 EIF3HO15372 352 aaKnown RBP eCLIP21.07■□□□□ 0.96
USP42-205ENST00000465073 SUSD5O60279 629 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 SCELO95171 688 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 ETHE1O95571 254 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 P04436 131 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 HOXD4P09016 255 aaPredicted RBP21.07■□□□□ 0.96
USP42-205ENST00000465073 COX7A2P14406 83 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 SERPINB1P30740 379 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 MAGEA5P43359 124 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 RAB10P61026 200 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 FOXO1Q12778 655 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 ZKSCAN8Q15776 578 aaPredicted RBP21.07■□□□□ 0.96
USP42-205ENST00000465073 PIGGQ5H8A4 983 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 MED27Q6P2C8 311 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 ZNF721Q8TF20 911 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 KRT12Q99456 494 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 PHACTR1Q9C0D0 580 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 SAYSD1Q9NPB0 183 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 TNFRSF10DQ9UBN6 386 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 KCNN3Q9UGI6 736 aa21.07■□□□□ 0.96
USP42-205ENST00000465073 INTS1Q8N201 2190 aaKnown RBP21.06■□□□□ 0.96
USP42-205ENST00000465073 DNAJC13O75165 2243 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 SPG11Q96JI7 2443 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 RTCAO00442 366 aaKnown RBP21.06■□□□□ 0.96
USP42-205ENST00000465073 AQP7O14520 342 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 CPN2P22792 545 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 ID2Q02363 134 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 PCDH1Q08174 1060 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 CALCOCO2Q13137 446 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 BIKQ13323 160 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 SLC10A1Q14973 349 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 ZNF585AQ6P3V2 769 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 LAS2Q8IYD9 372 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 OR10Q1Q8NGQ4 319 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 STAG3L4Q8TBR4 150 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 CMTM7Q96FZ5 175 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 SENP5Q96HI0 755 aaPredicted RBP21.06■□□□□ 0.96
USP42-205ENST00000465073 ZNF559Q9BR84 538 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 TTYH2Q9BSA4 534 aa21.06■□□□□ 0.96
USP42-205ENST00000465073 SETD2Q9BYW2 2564 aaPredicted RBP21.05■□□□□ 0.96
USP42-205ENST00000465073 TCRBV9S1A1TA0A576 114 aa21.05■□□□□ 0.96
USP42-205ENST00000465073 FAM159BA6NKW6 160 aa21.05■□□□□ 0.96
USP42-205ENST00000465073 DYRK3O43781 588 aa21.05■□□□□ 0.96
USP42-205ENST00000465073 ZNF354AO60765 605 aaPredicted RBP21.05■□□□□ 0.96
USP42-205ENST00000465073 TGFB1P01137 390 aa21.05■□□□□ 0.96
USP42-205ENST00000465073 SSR2P43308 183 aa21.05■□□□□ 0.96
USP42-205ENST00000465073 STT3AP46977 705 aa21.05■□□□□ 0.96
USP42-205ENST00000465073 IGLV3-21P80748 117 aaPredicted RBP21.05■□□□□ 0.96
USP42-205ENST00000465073 B3GNT6Q6ZMB0 384 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms