RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 LIPJQ5W064 366 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 CEP128Q6ZU80 1094 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 NCCRP1Q6ZVX7 275 aaPredicted RBP12.38□□□□□ -0.43
EDEM1-202ENST00000434243 MCEMP1Q8IX19 187 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 GPALPP1Q8IXQ4 340 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 ZNF321PQ8N8H1 164 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 OR5L2Q8NGL0 311 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 IFT81Q8WYA0 676 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 ATP6V1E2Q96A05 226 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 REPS1Q96D71 796 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 DGAT2Q96PD7 388 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 CHST11Q9NPF2 352 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 ZDHHC18Q9NUE0 388 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 NINJ2Q9NZG7 142 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 COPS7AQ9UBW8 275 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 PCDHGA11Q9Y5H2 935 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 IKBKGQ9Y6K9 419 aa12.38□□□□□ -0.43
EDEM1-202ENST00000434243 SPTBN1Q01082 2364 aaKnown RBP12.38□□□□□ -0.43
EDEM1-202ENST00000434243 SPTAN1Q13813 2472 aaKnown RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 NAV2Q8IVL1 2488 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 SVILO95425 2214 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 HMX2A2RU54 273 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 TMEM200CA6NKL6 621 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 G3V3Y1 287 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 FGF17O60258 216 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 ETHE1O95571 254 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 ACSL3O95573 720 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 INHBAP08476 426 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 PRF1P14222 555 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 COX6B1P14854 86 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 TLX1P31314 330 aaPredicted RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 PTGS2P35354 604 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 SOX3P41225 446 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 PIK3CBP42338 1070 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 HK2P52789 917 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 ALDH18A1P54886 795 aaKnown RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 RPS13P62277 151 aaKnown RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 RNF4P78317 190 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 GTF2H2Q13888 395 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 E2F2Q14209 437 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 ZNF630Q2M218 657 aaPredicted RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 ZNF750Q32MQ0 723 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 GTF2H2CQ6P1K8 395 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 GPR180Q86V85 440 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 DOLPP1Q86YN1 238 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 EID3Q8N140 333 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 PSD4Q8NDX1 1056 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 ANKRD9Q96BM1 317 aaPredicted RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 PPWD1Q96BP3 646 aaKnown RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 RBM18Q96H35 190 aaKnown RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 SCYL1Q96KG9 808 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 PHF12Q96QT6 1004 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 RASL10BQ96S79 203 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 DEFB127Q9H1M4 99 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 RPF2Q9H7B2 306 aaKnown RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 IPPKQ9H8X2 491 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 DMRT3Q9NQL9 472 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 MS4A12Q9NXJ0 267 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 PPT2Q9UMR5 302 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 TNPO3Q9Y5L0 923 aaKnown RBP12.37□□□□□ -0.43
EDEM1-202ENST00000434243 MAST4O15021 2626 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
EDEM1-202ENST00000434243 CCDC189A1A4V9 331 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 FAM166BA8MTA8 275 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 ACOT7O00154 380 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PLPP1O14494 284 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PRKRAO75569 313 aaKnown RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 SCELO95171 688 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 SIX3O95343 332 aaPredicted RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 CLDN14O95500 239 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 ALDOAP04075 364 aaKnown RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PTX3P26022 381 aaPredicted RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 BUD31P41223 144 aaPredicted RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PIK3CGP48736 1102 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PCDH1Q08174 1060 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PCBP2Q15366 365 aaKnown RBP eCLIP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 WHAMMP3Q1A5X7 153 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 UBAP2Q5T6F2 1119 aaKnown RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 C18orf63Q68DL7 685 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PAOXQ6QHF9 649 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 CYP20A1Q6UW02 462 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 GOLGA7Q7Z5G4 137 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 CD163Q86VB7 1156 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 TICAM1Q8IUC6 712 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 C7orf57Q8NEG2 295 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 OR52N2Q8NGI0 321 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 C16orf52Q8NHV5 167 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 DOK4Q8TEW6 326 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 TANKQ92844 425 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 MTFMTQ96DP5 389 aaKnown RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PHF21BQ96EK2 531 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
EDEM1-202ENST00000434243 ACSS3Q9H6R3 686 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 DEPPQ9NTK1 212 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 PHF11Q9UIL8 331 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 RNF11Q9Y3C5 154 aa12.36□□□□□ -0.43
EDEM1-202ENST00000434243 NBPF19A0A087WUL8 3843 aa12.35□□□□□ -0.43
EDEM1-202ENST00000434243 PINLYPA6NC86 204 aa12.35□□□□□ -0.43
EDEM1-202ENST00000434243 ENO4A6NNW6 628 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms