RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ST6GALNAC5Q9BVH7 336 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 SMPD3Q9NY59 655 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 ZFR2Q9UPR6 939 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 AHSA1O95433 338 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 RBM34P42696 430 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 CERS6Q6ZMG9 384 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 INPP4AQ96PE3 977 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 A0A1W2PP55 124 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 PAK4O96013 591 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 LIPCP11150 499 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 PSPHP78330 225 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 THOC6Q86W42 341 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 OPA3Q9H6K4 179 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 TLR9Q9NR96 1032 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 ASB6Q9NWX5 421 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 WDR45Q9Y484 360 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 KCTD3Q9Y597 815 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 ARVCFO00192 962 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 CX3CR1P49238 355 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 CAMK2DQ13557 499 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 PAN3Q58A45 887 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 DPY19L3Q6ZPD9 716 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 KCNA7Q96RP8 456 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 CNOT11Q9UKZ1 510 aaKnown RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 GNAZP19086 355 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PTGER3P43115 390 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 DNM1P34Q6PK57 102 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 BATF2Q8N1L9 274 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 LILRB2Q8N423 598 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 KLHL42Q9P2K6 505 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PIM1P11309 404 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 GLDCP23378 1020 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF84P51523 738 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PON2Q15165 354 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 ESCO2Q56NI9 601 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 ZFP41Q8N8Y5 198 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 RSC1A1Q92681 617 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 RETREG1Q9H6L5 497 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 VSX1Q9NZR4 365 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 LSM5Q9Y4Y9 91 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 H7C417 338 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 K7EPI3 171 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 KNG1P01042 644 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 CREB1P16220 341 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 GRHL2Q6ISB3 625 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 OR7G1Q8NGA0 311 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PCBD2Q9H0N5 130 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 SYNPO2LQ9H987 977 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 UBE2J1Q9Y385 318 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PCDHGB7Q9Y5F8 929 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 HAS3O00219 553 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 MAP2K7O14733 419 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 SSX4O60224 188 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 ARHGEF15O94989 841 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 CD3GP09693 182 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 TMEM107Q6UX40 140 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF619Q8N2I2 560 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 OR2A12Q8NGT7 310 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF516Q92618 1163 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 OR14J1Q9UGF5 321 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 DNM1LO00429 736 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 GRID2O43424 1007 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 NUDT21O43809 227 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 SHFQ7M4L6 423 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 TMPRSS7Q7RTY8 843 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 RNF130Q86XS8 419 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PGAM4Q8N0Y7 254 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 CALML5Q9NZT1 146 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 DISC1C4P0D8 188 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 TAS2R39P59534 338 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 TMEM236Q5W0B7 351 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 MEX3BQ6ZN04 569 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 GALNT6Q8NCL4 622 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PEX11GQ96HA9 241 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF681Q96N22 645 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 NDUFAF4Q9P032 175 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 PPLO60437 1756 aa16.36■□□□□ 0.21
CACNA1A-253ENST00000637927 RAB28P51157 221 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 YBEYP58557 167 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 GNMTQ14749 295 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 USP43Q70EL4 1123 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 TAMM41Q96BW9 452 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 Q9N2J8 555 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF282Q9UDV7 671 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 FAM221BA6H8Z2 402 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 FGF18O76093 207 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 IFNA5P01569 189 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 C6P13671 934 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 PAX3P23760 479 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 ADGRD1Q6QNK2 874 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 LRRTM4Q86VH4 590 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 DDX1Q92499 740 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 DIO2Q92813 273 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 TSPAN18Q96SJ8 248 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 MRPL22Q9NWU5 206 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 EPHA6Q9UF33 1036 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 TMEM265A0A087WTH1 108 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 AGPAT2O15120 278 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 AP1G1O43747 822 aa16.35■□□□□ 0.21
CACNA1A-253ENST00000637927 KLHDC7BQ96G42 594 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms