RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 COQ7Q99807 217 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 UGT2B28Q9BY64 529 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 MKRN2Q9H000 416 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 CCNB1IP1Q9NPC3 277 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 MAN2B2Q9Y2E5 1009 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 GNG14A0A1W2PPG7 69 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ERVH48-1M5A8F1 160 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 MED26O95402 600 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 GBAP04062 536 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ANXA4P09525 319 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ACPPP15309 386 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 PTPN6P29350 595 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 S100A5P33763 92 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 PRIM2P49643 509 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 RAE1P78406 368 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ZNF33BQ06732 778 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 HKDC1Q2TB90 917 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 TPRG1LQ5T0D9 272 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 LRIF1Q5T3J3 769 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 KIAA1211LQ6NV74 962 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ENPP6Q6UWR7 440 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 LRRTM4Q86VH4 590 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 AMER2Q8N7J2 671 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 FAM162AQ96A26 154 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 FCRL1Q96LA6 429 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 RIPOR3Q96MK2 946 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 CCDC115Q96NT0 180 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 CPPED1Q9BRF8 314 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 SGPP1Q9BX95 441 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 GON7Q9BXV9 100 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 SLC6A17Q9H1V8 727 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 SPNS1Q9H2V7 528 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 CARS2Q9HA77 564 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 BRF2Q9HAW0 419 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ITM2CQ9NQX7 267 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 SCN3BQ9NY72 215 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 RABL2BQ9UNT1 228 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 SPEF1Q9Y4P9 236 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 HSPE1-MOB4S4R3N1 261 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 PNMA8CA0A1B0GUJ8 204 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 CXCR6O00574 342 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 CAPN5O15484 640 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 YES1P07947 543 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ITGAMP11215 1152 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 ALOX12P18054 663 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 POLR2CP19387 275 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 GTF2E2P29084 291 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 MAP2K4P45985 399 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 SLC14A1Q13336 389 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 PDZD3Q86UT5 571 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 GATAD2AQ86YP4 633 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 FAM109AQ8N4B1 249 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 TFGQ92734 400 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 NELL1Q92832 810 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 RPRD1BQ9NQG5 326 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 MOSPD1Q9UJG1 213 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 BTBD3Q9Y2F9 522 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 NUP214P35658 2090 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-205ENST00000594973 PIPSLA2A3N6 862 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 K7EQS6 105 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 FPGTO14772 594 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 CPSF4O95639 269 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 TGFB1P01137 390 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 LAMP1P11279 417 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 HSD3B1P14060 373 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 HSD3B2P26439 372 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ETV6P41212 452 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 PCDH1Q08174 1060 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 RAB30Q15771 203 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 LRRC56Q8IYG6 542 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 CLECL1Q8IZS7 167 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ZNF740Q8NDX6 193 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 DNAJB8Q8NHS0 232 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 SLC5A11Q8WWX8 675 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 C11orf24Q96F05 449 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 GORASP2Q9H8Y8 452 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 LTB4R2Q9NPC1 389 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 PAQR5Q9NXK6 330 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 PCDHGB6Q9Y5F9 930 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 DOCK9Q9BZ29 2069 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 LOC110117498-PIK3R3F6TDL0 507 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 SHOXO15266 292 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 LATO43561 262 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 XPNPEP2O43895 674 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ADH1BP00325 375 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 C1GALT1C1LP0DN25 315 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 CD36P16671 472 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 C5AR1P21730 350 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 TGFBR2P37173 567 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 OR3A3P47888 321 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 MTAPQ13126 283 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 IRF4Q15306 451 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ATG9BQ674R7 924 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 ZNF621Q6ZSS3 439 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 MICU2Q8IYU8 434 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 PIK3R3Q92569 461 aa16.3■□□□□ 0.2
SHKBP1-205ENST00000594973 SH3KBP1Q96B97 665 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms