RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 GLOD5A6NK44 160 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 A8MUA0 341 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 BIRC5O15392 142 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 LDB3O75112 727 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 SERPINE1P05121 402 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 FAM58BPP0C7Q3 252 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 UROSP10746 265 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 NEFHP12036 1026 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 IL10P22301 178 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 CPN2P22792 545 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 CSTF3Q12996 717 aaKnown RBP11.86□□□□□ -0.51
RETREG3-203ENST00000585894 SLC13A2Q13183 592 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 PCOLCEQ15113 449 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 C10orf62Q5T681 223 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-203ENST00000585894 KANK2Q63ZY3 851 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 CYP20A1Q6UW02 462 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 GPR180Q86V85 440 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 OR4N5Q8IXE1 308 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 ZCCHC7Q8N3Z6 543 aaKnown RBP11.86□□□□□ -0.51
RETREG3-203ENST00000585894 OR2T11Q8NH01 316 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 SREK1Q8WXA9 508 aaKnown RBP11.86□□□□□ -0.51
RETREG3-203ENST00000585894 EBPLQ9BY08 206 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 CLK4Q9HAZ1 481 aaKnown RBP11.86□□□□□ -0.51
RETREG3-203ENST00000585894 LYRM4Q9HD34 91 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 PRTFDC1Q9NRG1 225 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 TEX10Q9NXF1 929 aaPredicted RBP11.86□□□□□ -0.51
RETREG3-203ENST00000585894 NKIRAS1Q9NYS0 192 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 VPS29Q9UBQ0 182 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 ZDHHC2Q9UIJ5 367 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 ASB4Q9Y574 426 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 CLDN16Q9Y5I7 305 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 DNAJC15Q9Y5T4 150 aa11.86□□□□□ -0.51
RETREG3-203ENST00000585894 LOC102723996A0A087X1L8 192 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 IGKV3D-11A0A0A0MRZ8 115 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 ERVH48-1M5A8F1 160 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 HSPA4LO95757 839 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 LINC00032P0C843 101 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 HSD3B1P14060 373 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 HSD3B2P26439 372 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 RAE1P78406 368 aaKnown RBP11.85□□□□□ -0.51
RETREG3-203ENST00000585894 SFT2D3Q587I9 215 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 SPDYAQ5MJ70 313 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 CCNYL2Q5T2Q4 361 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 MRM1Q6IN84 353 aaKnown RBP11.85□□□□□ -0.51
RETREG3-203ENST00000585894 QSOX2Q6ZRP7 698 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 MED25Q71SY5 747 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 CPEB2Q7Z5Q1 589 aaKnown RBP11.85□□□□□ -0.51
RETREG3-203ENST00000585894 APLFQ8IW19 511 aaPredicted RBP11.85□□□□□ -0.51
RETREG3-203ENST00000585894 SCUBE1Q8IWY4 988 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 ZNF781Q8N8C0 355 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 TMEM102Q8N9M5 508 aaPredicted RBP11.85□□□□□ -0.51
RETREG3-203ENST00000585894 PLPP5Q8NEB5 264 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 CHTF18Q8WVB6 975 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 IP6K3Q96PC2 410 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 WDR77Q9BQA1 342 aaPredicted RBP11.85□□□□□ -0.51
RETREG3-203ENST00000585894 PRDM9Q9NQV7 894 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 GIMAP2Q9UG22 337 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 TRAF6Q9Y4K3 522 aa11.85□□□□□ -0.51
RETREG3-203ENST00000585894 CFAP46Q8IYW2 2715 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 NSG1A0A0A6YYJ2 146 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 SKAP2O75563 359 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-203ENST00000585894 AIFM1O95831 613 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 HPP00738 406 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 PDGFAP04085 211 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 JUNP05412 331 aaKnown RBP11.84□□□□□ -0.51
RETREG3-203ENST00000585894 TSFMP43897 325 aaKnown RBP11.84□□□□□ -0.51
RETREG3-203ENST00000585894 OR4D2P58180 307 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
RETREG3-203ENST00000585894 TNFRSF17Q02223 184 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 BST1Q10588 318 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 KCNAB2Q13303 367 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 IMPG1Q17R60 797 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 UGT3A2Q3SY77 523 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 NDUFAF7Q7L592 441 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 GBP7Q8N8V2 638 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-203ENST00000585894 FDCSPQ8NFU4 85 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 DOK4Q8TEW6 326 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 TWIST2Q8WVJ9 160 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 ABHD17AQ96GS6 310 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 FER1L6-AS2Q96M78 137 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 SORT1Q99523 831 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 ZNF700Q9H0M5 742 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 EML4Q9HC35 981 aaKnown RBP11.84□□□□□ -0.51
RETREG3-203ENST00000585894 ZNF71Q9NQZ8 489 aaPredicted RBP11.84□□□□□ -0.51
RETREG3-203ENST00000585894 AHSPQ9NZD4 102 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 CCL27Q9Y4X3 112 aa11.84□□□□□ -0.51
RETREG3-203ENST00000585894 A0A1W2PS29 197 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 TCRBV16S1A1N1A0A5B0 115 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 H3BQF6 201 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PIP5K1BO14986 540 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PROM1O43490 865 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 FGF17O60258 216 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ITGA3P26006 1051 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 SLC1A6P48664 564 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ARFIP1P53367 373 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 MAPK12P53778 367 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 RRADP55042 308 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ACSM2AQ08AH3 577 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ACSM2BQ68CK6 577 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms