RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CDC42P60953 191 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 MFSD14BQ5SR56 506 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 MANEAQ5SRI9 462 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 GSG1LQ6UXU4 331 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 CATSPERGQ6ZRH7 1159 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 USP53Q70EK8 1073 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM200AQ86VY9 491 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM185AQ8N0U4 392 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 GTPBP8Q8N3Z3 284 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 HTR3CQ8WXA8 447 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 FCGR1BQ92637 280 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ESAMQ96AP7 390 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 IL4I1Q96RQ9 567 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ACKR4Q9NPB9 350 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 DCP1AQ9NPI6 582 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 EXTL2Q9UBQ6 330 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 MMACHCQ9Y4U1 282 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 NCANO14594 1321 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 SPATA31A6Q5VVP1 1343 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 AQP7P3A6NL99 342 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 WASH4PA8MWX3 477 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 VIPP01282 170 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 RRASP10301 218 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 DAOP14920 347 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC1A2P43004 574 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 HSPA2P54652 639 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 PPP3CAQ08209 521 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 INCA1Q0VD86 236 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 TTLL4Q14679 1199 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ASTE1Q2TB18 679 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 OVOS1Q6IE37 1185 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM171BQ6P995 826 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ILDR2Q71H61 639 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ZBTB38Q8NAP3 1195 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 INO80EQ8NBZ0 244 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 TRPC4Q9UBN4 977 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 A0A1B0GWJ7 208 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 LINC00862A6NCI5 91 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 BLOC1S5-TXNDC5H3BN57 136 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 FOXE1O00358 373 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 CLN5O75503 358 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 CSTAP01040 98 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 CPN2P22792 545 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 GPX4P36969 197 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 LUMP51884 338 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 C7orf61Q8IZ16 206 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 MINDY1Q8N5J2 469 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ZPBPQ9BS86 351 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ELP3Q9H9T3 547 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 C19orf12Q9NSK7 152 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 M0R143 59 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 CNOT4O95628 575 aaKnown RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 OXTRP30559 389 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 NAA10P41227 235 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 NOL9Q5SY16 702 aaKnown RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC35F1Q5T1Q4 408 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 NAPEPLDQ6IQ20 393 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC27A4Q6P1M0 643 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 TFAP2DQ7Z6R9 452 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 VTCN1Q7Z7D3 282 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 MFSD4AQ8N468 514 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF419Q96HQ0 510 aaPredicted RBP8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 LDAHQ9H6V9 325 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 RAD18Q9NS91 495 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 ZMIZ1Q9ULJ6 1067 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 TBC1D30Q9Y2I9 924 aa8.67□□□□□ -1.02
GTF2A1-203ENST00000553612 B4DXG7 233 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR89AB7ZAQ6 455 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM189A1O60320 539 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR89BP0CG08 455 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 ARSAP15289 507 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 TSHRP16473 764 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 CYP2F1P24903 491 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 CCND3P30281 292 aaPredicted RBP8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 PARP15Q460N3 678 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 C22orf42Q6IC83 251 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM183BPQ6ZVS7 135 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF433Q8N7K0 673 aaPredicted RBP8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 OR14A16Q8NHC5 309 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 MFSD8Q8NHS3 518 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM175Q9BSA9 504 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 ASAH2Q9NR71 780 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 SMCO4Q9NRQ5 59 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 RNF19AQ9NV58 838 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 AKT3Q9Y243 479 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM95CA0A1B0GW59 222 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 DCDC2BA2VCK2 349 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 PRORSD1PA6NEY8 169 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 ARVCFO00192 962 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 HBQ1P09105 142 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 PSMA3P25788 255 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 ARL3P36405 182 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 FMO1Q01740 532 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 DSC2Q02487 901 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM35AQ53FP2 167 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 LIPMQ5VYY2 423 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 P4HA3Q7Z4N8 544 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 LHFPL3Q86UP9 236 aa8.66□□□□□ -1.02
GTF2A1-203ENST00000553612 IGDCC3Q8IVU1 814 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms