RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 HSD17B7P56937 341 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TAS2R50P59544 299 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 VSNL1P62760 191 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TGM3Q08188 693 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TUBA3CQ13748 450 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TERF2Q15554 542 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 MEP1AQ16819 746 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TMEM35AQ53FP2 167 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TECRLQ5HYJ1 363 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 ZNF324BQ6AW86 544 aaPredicted RBP8.27□□□□□ -1.09
CHD4-204ENST00000535810 GRHL2Q6ISB3 625 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 MED27Q6P2C8 311 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 KLC3Q6P597 504 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TUBA3EQ6PEY2 450 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 ZNF793Q6ZN11 406 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TAOK1Q7L7X3 1001 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TEX9Q8N6V9 391 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 MDS2Q8NDY4 140 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 NFAM1Q8NET5 270 aaPredicted RBP8.27□□□□□ -1.09
CHD4-204ENST00000535810 SUN3Q8TAQ9 357 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 SSC4DQ8WTU2 575 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 DCAKDQ8WVC6 231 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHD4-204ENST00000535810 HPS1Q92902 700 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 COPS7BQ9H9Q2 264 aaPredicted RBP8.27□□□□□ -1.09
CHD4-204ENST00000535810 PRTFDC1Q9NRG1 225 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 ANKRD10Q9NXR5 420 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 CPSF2Q9P2I0 782 aaKnown RBP8.27□□□□□ -1.09
CHD4-204ENST00000535810 XPR1Q9UBH6 696 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 ERRFI1Q9UJM3 462 aaPredicted RBP8.27□□□□□ -1.09
CHD4-204ENST00000535810 NFU1Q9UMS0 254 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 DAPP1Q9UN19 280 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 MRPS33Q9Y291 106 aaKnown RBP8.27□□□□□ -1.09
CHD4-204ENST00000535810 IKBKGQ9Y6K9 419 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 A0A087WUV0 522 aaPredicted RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 GABRR3A8MPY1 467 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 A8MUA0 341 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 TMEM229AB2RXF0 380 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 POC1B-GALNT4F8VUJ3 575 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 SAP18O00422 153 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 RTCAO00442 366 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 CLDN4O14493 209 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 SH3BGRLO75368 114 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 SIX3O95343 332 aaPredicted RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 TGFB1P01137 390 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ABHD2P08910 425 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 HIST1H1TP22492 207 aaPredicted RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 CD96P40200 585 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PIK3CBP42338 1070 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 SERPINB9P50453 376 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ST13P50502 369 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 TDGF1P3P51864 188 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PRR20EP86478 221 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PRR20CP86479 221 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PRR20DP86480 221 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PRR20BP86481 221 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PRR20AP86496 221 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 SLC13A2Q13183 592 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 DDX39BQ13838 428 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 GTF2H2Q13888 395 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 RCN2Q14257 317 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PCBP2Q15366 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHD4-204ENST00000535810 OR1C1Q15619 314 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ZNF766Q5HY98 468 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ZNF468Q5VIY5 522 aaPredicted RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 KHDRBS2Q5VWX1 349 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 SPINK14Q6IE38 97 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 GTF2H2CQ6P1K8 395 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 METTL2BQ6P1Q9 378 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 HDXQ7Z353 690 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 GOLGA7Q7Z5G4 137 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 CLNKQ7Z7G1 428 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 RPS19BP1Q86WX3 136 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 MYLK4Q86YV6 388 aaPredicted RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 ZNF595Q8IYB9 648 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ARMC10Q8N2F6 343 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 RNF175Q8N4F7 328 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PTGR2Q8N8N7 351 aaPredicted RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 ACOT4Q8N9L9 421 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 EIF1ADQ8N9N8 165 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 APCDD1LQ8NCL9 501 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 SRFBP1Q8NEF9 429 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 B3GNT7Q8NFL0 401 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 HUS1BQ8NHY5 278 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 UHMK1Q8TAS1 419 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 NR4A3Q92570 626 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 SIGLEC12Q96PQ1 595 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 UTP23Q9BRU9 249 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 TBCDQ9BTW9 1192 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ROGDIQ9GZN7 287 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ACTR8Q9H981 624 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 LYRM4Q9HD34 91 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 DMRT3Q9NQL9 472 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ZNF358Q9NW07 568 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 KCMF1Q9P0J7 381 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ABI3Q9P2A4 366 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 PPIEQ9UNP9 301 aaKnown RBP8.26□□□□□ -1.09
CHD4-204ENST00000535810 TSC22D4Q9Y3Q8 395 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 ANGPTL3Q9Y5C1 460 aa8.26□□□□□ -1.09
CHD4-204ENST00000535810 TNPO3Q9Y5L0 923 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms