RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CFAP61Q8NHU2 1237 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 ZNF671Q8TAW3 534 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 SLC26A7Q8TE54 656 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 TFB1MQ8WVM0 346 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 SEPT1Q8WYJ6 367 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 PTERQ96BW5 349 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 CDHR1Q96JP9 859 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 CPNE1Q99829 537 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 ING2Q9H160 280 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 GOLPH3LQ9H4A5 285 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 NOL11Q9H8H0 719 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 RPF1Q9H9Y2 349 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 TIGARQ9NQ88 270 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 MIEF1Q9NQG6 463 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 PIH1D3Q9NQM4 214 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 MRGBPQ9NV56 204 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 GDE1Q9NZC3 331 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 CRNNQ9UBG3 495 aaPredicted RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 AGTPBP1Q9UPW5 1226 aa0.33□□□□□ -2.36
COPB1-212ENST00000534771 PTRH2Q9Y3E5 179 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 MYH14Q7Z406 1995 aaKnown RBP0.33□□□□□ -2.36
COPB1-212ENST00000534771 TRBV6-6A0A0A6YYG2 114 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 A0A1B0GVC2 190 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 RNF212BA8MTL3 300 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ZNF724A8MTY0 619 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ANHXE9PGG2 379 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 TRIM77I1YAP6 450 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 IFRD1O00458 451 aaPredicted RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 CLDN4O14493 209 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 MLNRO43193 412 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 AP5Z1O43299 807 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 WDHD1O75717 1129 aaPredicted RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 FGF19O95750 216 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SCGB1D1O95968 90 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 FCGR3AP08637 254 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SNRPCP09234 159 aaKnown RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 SBK2P0C263 348 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 STAG3L1P0CL83 205 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 GABRR1P24046 479 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 PSMB10P40306 273 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 XCR1P46094 333 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 RPS10P46783 165 aaKnown RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 NRIP1P48552 1158 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SLC26A2P50443 739 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ARHGDIAP52565 204 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 STAT2P52630 851 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 BACE1P56817 501 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 UBXN2AP68543 259 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 MEF2BQ02080 365 aaPredicted RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 MSLNQ13421 630 aaPredicted RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 PDE7AQ13946 482 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SERTAD2Q14140 314 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 KRT32Q14532 448 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 PTPRCAPQ14761 206 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SLC10A1Q14973 349 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 PTGISQ16647 500 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ANKRD55Q3KP44 614 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 LACTB2Q53H82 288 aaPredicted RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 ODF2Q5BJF6 829 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ZNF542PQ5EBM4 170 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 PLEKHS1Q5SXH7 462 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 C6orf163Q5TEZ5 329 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 NEPROQ6NW34 567 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 BRD3OSQ6XYD6 125 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ZFP2Q6ZN57 461 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ZNF836Q6ZNA1 936 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ZBTB49Q6ZSB9 765 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 DET1Q7L5Y6 550 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ANKRD33Q7Z3H0 272 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 TMEM179BQ7Z7N9 219 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 LINC01551Q86U37 167 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SMAP1Q8IYB5 467 aaPredicted RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 CPXCR1Q8N123 301 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 FBXW8Q8N3Y1 598 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 DCAF4L2Q8NA75 395 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 APPL2Q8NEU8 664 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 CD99L2Q8TCZ2 262 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 ARNTL2Q8WYA1 636 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 PYCR2Q96C36 320 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 PIWIL1Q96J94 861 aaKnown RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 SLC35E1Q96K37 410 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 TBATAQ96M53 351 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 GDAP1L1Q96MZ0 367 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 TTYH2Q9BSA4 534 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SLC17A9Q9BYT1 436 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 TRIM7Q9C029 511 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SNX25Q9H3E2 840 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 DPEP2Q9H4A9 486 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 EHD1Q9H4M9 534 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 OLA1Q9NTK5 396 aaKnown RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 ZNF446Q9NWS9 450 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 SAGE1Q9NXZ1 904 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 HAO2Q9NYQ3 351 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 LUZP4Q9P127 313 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 STOX2Q9P2F5 926 aaPredicted RBP0.32□□□□□ -2.36
COPB1-212ENST00000534771 AASSQ9UDR5 926 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 NCKAP1Q9Y2A7 1128 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 EXOC6BQ9Y2D4 811 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 WSB1Q9Y6I7 421 aa0.32□□□□□ -2.36
COPB1-212ENST00000534771 NID2Q14112 1375 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms