RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 METTL21AQ8WXB1 218 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 FER1L6-AS2Q96M78 137 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 TRMOQ9BU70 441 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 EBPLQ9BY08 206 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 C20orf27Q9GZN8 174 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 TUBB1Q9H4B7 451 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 DDX31Q9H8H2 851 aaKnown RBP12.05□□□□□ -0.48
VEGFA-224ENST00000523873 LYRM4Q9HD34 91 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 PRDM9Q9NQV7 894 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 ZDHHC2Q9UIJ5 367 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 ATG4BQ9Y4P1 393 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 ASB4Q9Y574 426 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 CLDN16Q9Y5I7 305 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 ZZEF1O43149 2961 aa12.05□□□□□ -0.48
VEGFA-224ENST00000523873 MGAQ8IWI9 3026 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 LOC102723996A0A087X1L8 192 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 NSG1A0A0A6YYJ2 146 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 A0A1W2PR48 441 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 GLOD5A6NK44 160 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 AIFM1O95831 613 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 HPP00738 406 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 FAM58BPP0C7Q3 252 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 HSD3B1P14060 373 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 HSD3B2P26439 372 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 RRADP55042 308 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 OR4D2P58180 307 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 RAE1P78406 368 aaKnown RBP12.04□□□□□ -0.48
VEGFA-224ENST00000523873 TNFRSF17Q02223 184 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 SLC13A2Q13183 592 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 CCNYL2Q5T2Q4 361 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 MED25Q71SY5 747 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 GPR180Q86V85 440 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 SCUBE1Q8IWY4 988 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 OR4N5Q8IXE1 308 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 MMP21Q8N119 569 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 TMEM102Q8N9M5 508 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-224ENST00000523873 FDCSPQ8NFU4 85 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 OR2T11Q8NH01 316 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 CHTF18Q8WVB6 975 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 IP6K3Q96PC2 410 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 UBL7Q96S82 380 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-224ENST00000523873 WDR77Q9BQA1 342 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-224ENST00000523873 ZNF700Q9H0M5 742 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 LYARQ9NX58 379 aaKnown RBP12.04□□□□□ -0.48
VEGFA-224ENST00000523873 TEX10Q9NXF1 929 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-224ENST00000523873 NKIRAS1Q9NYS0 192 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 AHSPQ9NZD4 102 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 VPS29Q9UBQ0 182 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 TRAF6Q9Y4K3 522 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 CFAP47Q6ZTR5 3102 aa12.04□□□□□ -0.48
VEGFA-224ENST00000523873 IGKV3D-11A0A0A0MRZ8 115 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 H3BQF6 201 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ATXN7O15265 892 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 PROM1O43490 865 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 SKAP2O75563 359 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 HSPA4LO95757 839 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 PDGFAP04085 211 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 LINC00032P0C843 101 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ITGA3P26006 1051 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 TSFMP43897 325 aaKnown RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 SLC1A6P48664 564 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ARFIP1P53367 373 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ABCE1P61221 599 aaKnown RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 KCNAB2Q13303 367 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 IMPG1Q17R60 797 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 UGT3A2Q3SY77 523 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 SPDYAQ5MJ70 313 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 PAPD4Q6PIY7 484 aaKnown RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 NDUFAF7Q7L592 441 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 CLYBLQ8N0X4 340 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 GOLGA6L1Q8N7Z2 621 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ZNF781Q8N8C0 355 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 GBP7Q8N8V2 638 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ADAMTS18Q8TE60 1221 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 DOK4Q8TEW6 326 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 TWIST2Q8WVJ9 160 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ANKRD9Q96BM1 317 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ABHD17AQ96GS6 310 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 IMMP1LQ96LU5 166 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 SORT1Q99523 831 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 NUDT9Q9BW91 350 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 EML4Q9HC35 981 aaKnown RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ATP13A2Q9NQ11 1180 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 C19orf25Q9UFG5 118 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 GIMAP2Q9UG22 337 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 PHF11Q9UIL8 331 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 MRPS33Q9Y291 106 aaKnown RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 TP53TG5Q9Y2B4 290 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 MMACHCQ9Y4U1 282 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 POLR3HQ9Y535 204 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-224ENST00000523873 DNAJC15Q9Y5T4 150 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 SPACA6W5XKT8 324 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 EML6Q6ZMW3 1958 aa12.03□□□□□ -0.48
VEGFA-224ENST00000523873 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
VEGFA-224ENST00000523873 A0A1W2PS29 197 aa12.02□□□□□ -0.49
VEGFA-224ENST00000523873 TCRBV16S1A1N1A0A5B0 115 aa12.02□□□□□ -0.49
VEGFA-224ENST00000523873 SERTM1A2A2V5 107 aa12.02□□□□□ -0.49
VEGFA-224ENST00000523873 TMEM114B3SHH9 223 aa12.02□□□□□ -0.49
VEGFA-224ENST00000523873 CLDN4O14493 209 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms