RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 RPF1Q9H9Y2 349 aaKnown RBP2.07□□□□□ -2.08
LMNB1-207ENST00000494185 PHPT1Q9NRX4 125 aaPredicted RBP2.07□□□□□ -2.08
LMNB1-207ENST00000494185 SLC7A10Q9NS82 523 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 HOMER3Q9NSC5 361 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 FAM212BQ9NTI7 297 aaPredicted RBP2.07□□□□□ -2.08
LMNB1-207ENST00000494185 ACOXLQ9NUZ1 547 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 EXOC1Q9NV70 894 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 SOHLH2Q9NX45 425 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 CACNG5Q9UF02 275 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 SH3GLB1Q9Y371 365 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 MRPS2Q9Y399 296 aaKnown RBP2.07□□□□□ -2.08
LMNB1-207ENST00000494185 DDX49Q9Y6V7 483 aaKnown RBP2.07□□□□□ -2.08
LMNB1-207ENST00000494185 RNF123Q5XPI4 1314 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 DISP3Q9P2K9 1392 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 NCAPD2Q15021 1401 aa2.07□□□□□ -2.08
LMNB1-207ENST00000494185 A0A087WZY1 265 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 CLRN2A0PK11 232 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TRIM49BA6NDI0 452 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 C15orf61A6NNL5 157 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TCP10L2B9ZVM9 353 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 NTN3O00634 580 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TFECO14948 347 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 MCF2LO15068 1137 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 KHDRBS3O75525 346 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 GRAP2O75791 330 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 IDH1O75874 414 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 DIRAS3O95661 229 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PTBP3O95758 552 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 AK1P00568 194 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 YES1P07947 543 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TPBGLP0DKB5 382 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 DLATP10515 647 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 HSPA5P11021 654 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 RPL35AP18077 110 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 UGT1A4P22310 534 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 AADACP22760 399 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 FCARP24071 287 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SSTR1P30872 391 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SFTPDP35247 375 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PTGER3P43115 390 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 NKX2-1P43699 371 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 HNMTP50135 292 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TNFSF10P50591 281 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 DNA2P51530 1060 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 CLCN4P51793 760 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ARFIP1P53367 373 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 CLDN17P56750 224 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 GSCP56915 257 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TRA2BP62995 288 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 FKBP1BP68106 108 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ELP6Q0PNE2 266 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 MSLNQ13421 630 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 RAPSNQ13702 412 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ENPP2Q13822 863 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 GK2Q14410 553 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PDIA5Q14554 519 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TMEM187Q14656 261 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 OPCMLQ14982 345 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 KARSQ15046 597 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 STX1AQ16623 288 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 XKR6Q5GH73 641 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 XKR3Q5GH77 459 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ARMCX4Q5H9R4 360 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PRAMEF7Q5VXH5 474 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SLC25A24Q6NUK1 477 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 UGT3A1Q6NUS8 523 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TTC27Q6P3X3 843 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 CTR9Q6PD62 1173 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF613Q6PF04 617 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TMEM207Q6UWW9 146 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 WDR88Q6ZMY6 472 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 MYPOPQ86VE0 399 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 AMZ2Q86W34 360 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 LACC1Q8IV20 430 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 STHQ8IWL8 128 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 RCOR2Q8IZ40 523 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TDHQ8IZJ6 230 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 METTL4Q8N3J2 472 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 MINDY2Q8NBR6 621 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 RNF149Q8NC42 400 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SLC37A3Q8NCC5 494 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SMAP2Q8WU79 429 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SLC5A11Q8WWX8 675 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 HAS2Q92819 552 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 RAB7BQ96AH8 199 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 MOCOSQ96EN8 888 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 DTNBP1Q96EV8 351 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PRAC1Q96KF2 57 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 C4orf45Q96LM5 186 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ZNF599Q96NL3 588 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 BTBD9Q96Q07 612 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 LGMNQ99538 433 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ALKBH7Q9BT30 221 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 THUMPD2Q9BTF0 503 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TDRD1Q9BXT4 1180 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 TEX13BQ9BXU2 312 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 SHARPINQ9H0F6 387 aa2.06□□□□□ -2.08
LMNB1-207ENST00000494185 PNNQ9H307 717 aaKnown RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 RIMS4Q9H426 269 aaPredicted RBP2.06□□□□□ -2.08
LMNB1-207ENST00000494185 ATP13A3Q9H7F0 1226 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms