RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ST6GALNAC3Q8NDV1 305 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 MDS2Q8NDY4 140 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 B3GNT7Q8NFL0 401 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 SUN3Q8TAQ9 357 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 WDR20Q8TBZ3 569 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ATP6V1E2Q96A05 226 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 REPS1Q96D71 796 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 MTFMTQ96DP5 389 aaKnown RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 MTBPQ96DY7 904 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 SLX1AQ9BQ83 275 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 UTP23Q9BRU9 249 aaKnown RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 NTMT1Q9BV86 223 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 SEMA4BQ9NPR2 832 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ABI3Q9P2A4 366 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 ZNF223Q9UK11 482 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 FBXW2Q9UKT8 454 aa12.05□□□□□ -0.48
HDAC1-209ENST00000484305 USP9YO00507 2555 aaPredicted RBP12.05□□□□□ -0.48
HDAC1-209ENST00000484305 TRBV11-1A0A0K0K1C0 115 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 A0A1B0GTL3 188 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 A8MT66 165 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 PPP6CO00743 305 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 ETHE1O95571 254 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 IFNA16P05015 189 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 RNF224P0DH78 156 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 EDN3P14138 238 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 CPN2P22792 545 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 PTX3P26022 381 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-209ENST00000484305 TPP2P29144 1249 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-209ENST00000484305 ARL1P40616 181 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-209ENST00000484305 GPR143P51810 404 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 CCNG1P51959 295 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 MLF1P58340 268 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 PHEXP78562 749 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 STX4Q12846 297 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 TRAF3Q13114 568 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 SLAMF1Q13291 335 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 OR1C1Q15619 314 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 INAQ16352 499 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 TEX35Q5T0J7 233 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 LGI4Q8N135 537 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 THAP3Q8WTV1 239 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-209ENST00000484305 NCLNQ969V3 563 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 ZNF717Q9BY31 904 aaPredicted RBP12.04□□□□□ -0.48
HDAC1-209ENST00000484305 HES7Q9BYE0 225 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 ALOXE3Q9BYJ1 711 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 DEFB126Q9BYW3 111 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 ADAP2Q9NPF8 381 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 OLAHQ9NV23 265 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 TMEM216Q9P0N5 145 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 TBK1Q9UHD2 729 aa12.04□□□□□ -0.48
HDAC1-209ENST00000484305 PPIEQ9UNP9 301 aaKnown RBP12.04□□□□□ -0.48
HDAC1-209ENST00000484305 ICE1Q9Y2F5 2266 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 IQANK1A0A1B0GTG1 560 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 BLACEA4D250 179 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 GOLGA8RI6L899 631 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 FOXE1O00358 373 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 PRKNO60260 465 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 NEURL1O76050 574 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 RASAL1O95294 804 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 RPS17P08708 135 aaKnown RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 TSPAN8P19075 237 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 BSGP35613 385 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 CLCN2P51788 898 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 TDGF1P3P51864 188 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 CDH13P55290 713 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 HNRNPH2P55795 449 aaKnown RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 PMP22Q01453 160 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ID2Q02363 134 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 OC90Q02509 493 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 CUL3Q13618 768 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ELAVL1Q15717 326 aaKnown RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 FAM219BQ5XKK7 198 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 OR4N5Q8IXE1 308 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ARMC10Q8N2F6 343 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ZCCHC7Q8N3Z6 543 aaKnown RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 EIF1ADQ8N9N8 165 aaKnown RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ZNF483Q8TF39 744 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 MZB1Q8WU39 189 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 PTPMT1Q8WUK0 201 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ANKRD9Q96BM1 317 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 CENPKQ9BS16 269 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 KLHL1Q9NR64 748 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 PSD3Q9NYI0 1048 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 PSMC3IPQ9P2W1 217 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 VTI1BQ9UEU0 232 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 FETUBQ9UGM5 382 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ERRFI1Q9UJM3 462 aaPredicted RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 ATG4BQ9Y4P1 393 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 CLCA3PQ9Y6N3 262 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 SPACA6W5XKT8 324 aa12.03□□□□□ -0.48
HDAC1-209ENST00000484305 SPTAN1Q13813 2472 aaKnown RBP12.03□□□□□ -0.48
HDAC1-209ENST00000484305 UTP20O75691 2785 aaKnown RBP12.02□□□□□ -0.48
HDAC1-209ENST00000484305 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 FGF17O60258 216 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 DLX3O60479 287 aa12.02□□□□□ -0.49
HDAC1-209ENST00000484305 EEDO75530 441 aaKnown RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 PRKRAO75569 313 aaKnown RBP12.02□□□□□ -0.49
HDAC1-209ENST00000484305 WISP2O76076 250 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms