RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SLC46A1Q96NT5 459 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TSSK3Q96PN8 268 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 GBP5Q96PP8 586 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TAAR9Q96RI9 348 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CMKLR1Q99788 373 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CTRCQ99895 268 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 NDC1Q9BTX1 674 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 NLNQ9BYT8 704 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ROGDIQ9GZN7 287 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CLMPQ9H6B4 373 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 REEP4Q9H6H4 257 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 SYNDIG1Q9H7V2 258 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 LYRM4Q9HD34 91 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 MYNNQ9NPC7 610 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 TEX10Q9NXF1 929 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 SLC39A1Q9NY26 324 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 ZIM2Q9NZV7 527 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CCDC167Q9P0B6 97 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 DHCR7Q9UBM7 475 aaKnown RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 RARRES3Q9UL19 164 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 DAPP1Q9UN19 280 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CDC14AQ9UNH5 594 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 WASF3Q9UPY6 502 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PCDHGA3Q9Y5H0 932 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 PCDHA9Q9Y5H5 950 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 CLDN16Q9Y5I7 305 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 B3GALT1Q9Y5Z6 326 aa5.62□□□□□ -1.51
USP39-213ENST00000467885 COL5A1P20908 1838 aaPredicted RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 RIF1Q5UIP0 2472 aaKnown RBP5.62□□□□□ -1.51
USP39-213ENST00000467885 IGLV3-12A0A075B6K2 115 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 PRSS51A0A1B0GVH4 220 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 A0A1W2PP18 115 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 GNG14A0A1W2PPG7 69 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 FAM234BA2RU67 622 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 FAM149AA5PLN7 773 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 ASPDHA6ND91 283 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 ZNF860A6NHJ4 632 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 VSTM2BA6NLU5 285 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 C9orf172C9J069 976 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 C9JVG2 144 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 MEN1O00255 615 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 PLD2O14939 933 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 NVLO15381 856 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 B3GALT2O43825 422 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 CTNSO60931 367 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SCRG1O75711 98 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 LRATO95237 230 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 BMP10O95393 424 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SNRPB2P08579 225 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 IL3P08700 152 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 COX4I1P13073 169 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 DDCP20711 480 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SDHBP21912 280 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 JAK1P23458 1154 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 PTPRZ1P23471 2315 aaPredicted RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 MAPK1P28482 360 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SOX18P35713 384 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 GSTM5P46439 218 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 ASMTP46597 345 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 NOVA1P51513 510 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 POLR2JP52435 117 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 HNRNPFP52597 415 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 EFNA3P52797 238 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 PCBP4P57723 403 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 OLR1P78380 273 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 BTG2P78543 158 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SRSF11Q05519 484 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 KLC1Q07866 573 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 SQLEQ14534 574 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 CEBPEQ15744 281 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 ZNF750Q32MQ0 723 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 VPS26BQ4G0F5 336 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 PAGE3Q5JUK9 113 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 DCAF12Q5T6F0 453 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 NDUFAF5Q5TEU4 345 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 C1orf189Q5VU69 101 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 ANKRD26P1Q6NSI1 321 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 NIPAL1Q6NVV3 410 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 PRMT9Q6P2P2 845 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 FAM199XQ6PEV8 388 aaPredicted RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 DLEU7Q6UYE1 221 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 COX15Q7KZN9 410 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 CAMKMTQ7Z624 323 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 NUDT13Q86X67 352 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 FAM9CQ8IZT9 166 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 FAM47BQ8NA70 645 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 UNC13CQ8NB66 2214 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 GLB1L3Q8NCI6 653 aaPredicted RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 OR8J2Q8NGG1 315 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 CLHC1Q8NHS4 586 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 WDR36Q8NI36 951 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 RP9Q8TA86 221 aaKnown RBP5.61□□□□□ -1.51
USP39-213ENST00000467885 ZCCHC10Q8TBK6 192 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 TANKQ92844 425 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 TESCQ96BS2 214 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 MTERF3Q96E29 417 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 RNF31Q96EP0 1072 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 MVB12AQ96EY5 273 aa5.61□□□□□ -1.51
USP39-213ENST00000467885 MMABQ96EY8 250 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms