RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 BCL9LQ86UU0 1499 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 E2F3O00716 465 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 EEDO75530 441 aaKnown RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 RGS9O75916 674 aaPredicted RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 CRYZL1O95825 349 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 AKR1C4P17516 323 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 HTR1EP28566 365 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 GPR4P46093 362 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 HLCSP50747 726 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 MAP4K2Q12851 820 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 NPRL3Q12980 569 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 NOXRED1Q6NXP6 359 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 MEX3DQ86XN8 651 aaKnown RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 RPLP0P6Q8NHW5 317 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 NETO1Q8TDF5 533 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 TCEAL4Q96EI5 215 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ZNF486Q96H40 463 aaPredicted RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 PCDHGA7Q9Y5G6 932 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 SCDO00767 359 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 LBX2Q6XYB7 198 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 RAB11FIP2Q7L804 512 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ZNF565Q8N9K5 539 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 OR13J1Q8NGT2 312 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 PRICKLE1Q96MT3 831 aaPredicted RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 DOHHQ9BU89 302 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 FEZF1A0PJY2 475 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 A6NHS1 94 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 RNF13O43567 381 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 NPPAP01160 153 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 PTPN6P29350 595 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ELP2Q6IA86 826 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 MCHR1Q99705 422 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 KCNK6Q9Y257 313 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 A0A0A6YYH2 397 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 A6NJ64 397 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 CDC123O75794 336 aaPredicted RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 NFATC1O95644 943 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 SOX3P41225 446 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 FPGSQ05932 587 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ILF3Q12906 894 aaKnown RBP eCLIP11.59□□□□□ -0.55
UBR4-205ENST00000417040 ZNF630Q2M218 657 aaPredicted RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 REEP3Q6NUK4 255 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 PNCKQ6P2M8 343 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ABHD11Q8NFV4 315 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 OR8J3Q8NGG0 315 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 NSMAFQ92636 917 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ZNF778Q96MU6 729 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 SMOQ99835 787 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 KCNK12Q9HB15 430 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 NLGN3Q9NZ94 848 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 CDH10Q9Y6N8 788 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 MYH6P13533 1939 aa11.58□□□□□ -0.55
UBR4-205ENST00000417040 PMM2O15305 246 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 RFC2P35250 354 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.561e-7■■■□□ 15.1
UBR4-205ENST00000417040 GPR33Q49SQ1 333 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ZNF527Q8NB42 609 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 KCNH6Q9H252 994 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ERVK-19Q9WJR5 959 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 KDELR3O43731 214 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 POP7O75817 140 aaKnown RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 SPDEFO95238 335 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 T-ENOLP0DO92 83 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 PVALBP20472 110 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 MLLT3P42568 568 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 RELAQ04206 551 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 CCL14Q16627 93 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 RPS26P11Q5JNZ5 115 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 CGB2Q6NT52 195 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 RELL1Q8IUW5 271 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 WDTC1Q8N5D0 677 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 DENND1AQ8TEH3 1009 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 MRGPRX2Q96LB1 330 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 INPP5KQ9BT40 448 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 ZNF701Q9NV72 531 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 A0A096LPI6 279 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 AGAP5A6NIR3 686 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 CAPN15O75808 1086 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 HCAR3P49019 387 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 IER5LQ5T953 404 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 CLECL1Q8IZS7 167 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 DEFB119Q8N690 84 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 KCTD13Q8WZ19 329 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 OVCA2Q8WZ82 227 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 SLC25A44Q96H78 314 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 SCGB3A2Q96PL1 93 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 SLC29A1Q99808 456 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 REEP4Q9H6H4 257 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 MRM3Q9HC36 420 aaKnown RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 CD93Q9NPY3 652 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 SCP2D1Q9UJQ7 156 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 TLX3O43711 291 aaPredicted RBP11.58□□□□□ -0.56
UBR4-205ENST00000417040 HPRP00739 348 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 IL3P08700 152 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 CBSLP0DN79 551 aa11.58□□□□□ -0.56
UBR4-205ENST00000417040 CHMP24386 653 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms