RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 KCMF1Q9P0J7 381 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 ABI3Q9P2A4 366 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 PLLPQ9Y342 182 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 CPAMD8Q8IZJ3 1885 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 ARHGAP10A1A4S6 786 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 SAGE2PA6NJ88 616 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 FAM227AF5H4B4 570 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 SAP18O00422 153 aaKnown RBP17.36■□□□□ 0.37
CHTOP-202ENST00000368687 GUCY1B2O75343 617 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 CPN2P22792 545 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 HMOX2P30519 316 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 DEKP35659 375 aaKnown RBP17.36■□□□□ 0.37
CHTOP-202ENST00000368687 SOX11P35716 441 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 BTG2P78543 158 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 STX4Q12846 297 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 CSTF3Q12996 717 aaKnown RBP17.36■□□□□ 0.37
CHTOP-202ENST00000368687 SLAMF1Q13291 335 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 KRT71Q3SY84 523 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 ABHD17BQ5VST6 288 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 GPR180Q86V85 440 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 SLC5A8Q8N695 610 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 CCNYL1Q8N7R7 359 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 GBP7Q8N8V2 638 aaPredicted RBP17.36■□□□□ 0.37
CHTOP-202ENST00000368687 BANPQ8N9N5 519 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 TANKQ92844 425 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 TRMOQ9BU70 441 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 ADAP2Q9NPF8 381 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 SLAMF7Q9NQ25 335 aa17.36■□□□□ 0.37
CHTOP-202ENST00000368687 A0A0A6YYD5 115 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 OR2W5A6NFC9 320 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 MASP2O00187 686 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 RTCAO00442 366 aaKnown RBP17.35■□□□□ 0.37
CHTOP-202ENST00000368687 ULK1O75385 1050 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 NEK2P51955 445 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 SLC26A5P58743 744 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 TNFRSF17Q02223 184 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 ELAVL1Q15717 326 aaKnown RBP17.35■□□□□ 0.37
CHTOP-202ENST00000368687 SLC6A19Q695T7 634 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 FRMD7Q6ZUT3 714 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 EFCAB3Q8N7B9 438 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 RBMXL3Q8N7X1 1067 aaKnown RBP17.35■□□□□ 0.37
CHTOP-202ENST00000368687 CDYL2Q8N8U2 506 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 METTL6Q8TCB7 284 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 DAZLQ92904 295 aaKnown RBP17.35■□□□□ 0.37
CHTOP-202ENST00000368687 ZNF354BQ96LW1 612 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 MAPKAP1Q9BPZ7 522 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 TRIM4Q9C037 500 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 ILKAPQ9H0C8 392 aaPredicted RBP17.35■□□□□ 0.37
CHTOP-202ENST00000368687 GSTO2Q9H4Y5 243 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 KCNK13Q9HB14 408 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 NECTIN3Q9NQS3 549 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 PTGFRNQ9P2B2 879 aa17.35■□□□□ 0.37
CHTOP-202ENST00000368687 PRRC2CQ9Y520 2896 aaKnown RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 IGHV3-20A0A0C4DH32 117 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 RGS16O15492 202 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 DYRK3O43781 588 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 SH3BGRLO75368 114 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 OR4F21O95013 312 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 MYZAPP0CAP1 466 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 ITGAMP11215 1152 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 COX7A2P14406 83 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 TSPAN8P19075 237 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 BSGP35613 385 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 NAGLUP54802 743 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 ZNF844Q08AG5 666 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 TLR1Q15399 786 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 B3GNTL1Q67FW5 361 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 H3F3CQ6NXT2 135 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 Q6ZS92 163 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 RPS27LQ71UM5 84 aaKnown RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 IQCKQ8N0W5 287 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 TMEM132CQ8N3T6 1108 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 RNF175Q8N4F7 328 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 PSMF1Q92530 271 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 CSF3RQ99062 836 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 PELOQ9BRX2 385 aaKnown RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 ZNF717Q9BY31 904 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 STMN4Q9H169 189 aaPredicted RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 EPN3Q9H201 632 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 RPF2Q9H7B2 306 aaKnown RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 ZNF225Q9UK10 706 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 FBXW2Q9UKT8 454 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 PPIEQ9UNP9 301 aaKnown RBP17.34■□□□□ 0.37
CHTOP-202ENST00000368687 SLC12A4Q9UP95 1085 aa17.34■□□□□ 0.37
CHTOP-202ENST00000368687 TTLL8A6PVC2 850 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 FOXO6A8MYZ6 492 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 MANBAO00462 879 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 TRIM13O60858 407 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 CRCPO75575 148 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 SORBS2O94875 1100 aaKnown RBP17.33■□□□□ 0.36
CHTOP-202ENST00000368687 PDYNP01213 254 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 FAM58BPP0C7Q3 252 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 NR2F6P10588 404 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 ARG2P78540 354 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 TLE1Q04724 770 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 MEP1AQ16819 746 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 NADK2Q4G0N4 442 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 MRM1Q6IN84 353 aaKnown RBP17.33■□□□□ 0.36
CHTOP-202ENST00000368687 LRIG3Q6UXM1 1119 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 SHISA5Q8N114 240 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms