RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 PCSK4Q6UW60 755 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 TMEM205Q6UW68 189 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 SCIMPQ6UWF3 145 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 APLFQ8IW19 511 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 METTL4Q8N3J2 472 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 ZCCHC7Q8N3Z6 543 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 TMEM52Q8NDY8 209 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 OR11G2Q8NGC1 345 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 SREK1Q8WXA9 508 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 C8orf44Q96CB5 159 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 MAPKAP1Q9BPZ7 522 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 ACPTQ9BZG2 426 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 LYRM4Q9HD34 91 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 VPS29Q9UBQ0 182 aa11.25□□□□□ -0.61
RABGGTA-218ENST00000560777 MED13Q9UHV7 2174 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 ATMQ13315 3056 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 A0A0A6YYD5 115 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 PSMD12O00232 456 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 PEX12O00623 359 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 AZIN1O14977 448 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 ITM2AO43736 263 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 TMPRSS11DO60235 418 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 PRMT3O60678 531 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 CRCPO75575 148 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 GBAP04062 536 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 KLK1P06870 262 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 CYC1P08574 325 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 C8orf89P0DMQ9 161 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 JAK1P23458 1154 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 HNRNPFP52597 415 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 HMGCS1Q01581 520 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 CSTF3Q12996 717 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 NSDHLQ15738 373 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 UGT3A2Q3SY77 523 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 DCAF10Q5QP82 559 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 HHATQ5VTY9 493 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 CPZQ66K79 652 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 MRM1Q6IN84 353 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 GBP7Q8N8V2 638 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 CHTF18Q8WVB6 975 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 PTCHD1Q96NR3 888 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 CSF3RQ99062 836 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 PAIP2Q9BPZ3 127 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 TRIM55Q9BYV6 548 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 C20orf27Q9GZN8 174 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 ING2Q9H160 280 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF395Q9H8N7 513 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 EML4Q9HC35 981 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 NMRK1Q9NWW6 199 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 AHSPQ9NZD4 102 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 FBXL4Q9UKA2 621 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 FBXW2Q9UKT8 454 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 TRAF6Q9Y4K3 522 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 ASB4Q9Y574 426 aa11.24□□□□□ -0.61
RABGGTA-218ENST00000560777 CACNA1GO43497 2377 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 A0A1W2PQ72 361 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 TMEM233B4DJY2 109 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 PCDH17O14917 1159 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 PROM1O43490 865 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 DNAJB5O75953 348 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 SERPINE1P05121 402 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 FAM58BPP0C7Q3 252 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 ACPPP15309 386 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 MAOAP21397 527 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 BGNP21810 368 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 TPP2P29144 1249 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 HNRNPH2P55795 449 aaKnown RBP11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 CHAF1BQ13112 559 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 KANK2Q63ZY3 851 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 QSOX2Q6ZRP7 698 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 LANCL3Q6ZV70 420 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 NDUFAF7Q7L592 441 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 COMMD6Q7Z4G1 85 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 ANKRD37Q7Z713 158 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 GPR180Q86V85 440 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 NUDT13Q86X67 352 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 SCUBE1Q8IWY4 988 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 ZNF595Q8IYB9 648 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 CLYBLQ8N0X4 340 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 AMER2Q8N7J2 671 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 EXD3Q8N9H8 876 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 FAM47BQ8NA70 645 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 PPP1R14CQ8TAE6 165 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 MGARPQ8TDB4 240 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 ADAMTS18Q8TE60 1221 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 METTL21AQ8WXB1 218 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 TSLPQ969D9 159 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 APIPQ96GX9 242 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 FER1L6-AS2Q96M78 137 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 TUBB1Q9H4B7 451 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 NECTIN3Q9NQS3 549 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 PRDM9Q9NQV7 894 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 MS4A12Q9NXJ0 267 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 NKIRAS1Q9NYS0 192 aa11.23□□□□□ -0.61
RABGGTA-218ENST00000560777 ZDHHC2Q9UIJ5 367 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms