RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 KLF15Q9UIH9 416 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 MCTS1Q9ULC4 181 aaKnown RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 DLGAP4Q9Y2H0 992 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 PCDHB14Q9Y5E9 798 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 FAM25EA8MYX2 175 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 SLC22A1O15245 554 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 RAD51DO75771 328 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 TYRP1P17643 537 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 SPINT3P49223 89 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 GATMP50440 423 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 AP2S1P53680 142 aaPredicted RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 ATP1A4Q13733 1029 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 MAD2L1BPQ15013 274 aaPredicted RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 NPY5RQ15761 445 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 TMEM53Q6P2H8 277 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 FIGLAQ6QHK4 219 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ARHGAP22Q7Z5H3 698 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 LRRN4Q8WUT4 740 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ZUFSPQ96AP4 578 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 POU2F3Q9UKI9 436 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 PPM1HQ9ULR3 514 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 SH3D21A4FU49 640 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 OR2T1O43869 369 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ZMPSTE24O75844 475 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 IL3P08700 152 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 SLURP2P0DP57 97 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 DDCP20711 480 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 FMO3P31513 532 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 BNIP1Q12981 228 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 PON2Q15165 354 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 PM20D1Q6GTS8 502 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ARHGAP11AQ6P4F7 1023 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 TTLL10Q6ZVT0 673 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 FBXL8Q96CD0 374 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 KATNBL1Q9H079 304 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ZFP57Q9NU63 452 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 DKK3Q9UBP4 350 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 CCRL2O00421 344 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 GLULP15104 373 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 EIF2DP41214 584 aaKnown RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 TMBIM6P55061 237 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 CSNK2A1P68400 391 aaPredicted RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 CTC1Q2NKJ3 1217 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 NOXRED1Q6NXP6 359 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 OPN5Q6U736 354 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 PYURFQ96I23 114 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 TGM7Q96PF1 710 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 TWNKQ96RR1 684 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 PCYT2Q99447 389 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 MCHR1Q99705 422 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 POLDIP3Q9BY77 421 aaKnown RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 IL37Q9NZH6 218 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ANKMY1Q9P2S6 941 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 ZNF142P52746 1687 aaPredicted RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 PHRF1Q9P1Y6 1649 aaKnown RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 TTC24A2A3L6 582 aaPredicted RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 PDLIM1O00151 329 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 TBX1O43435 398 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 BCHEP06276 602 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 ZNF35P13682 527 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 EDNRAP25101 427 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 STOMP27105 288 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 SLC18A2Q05940 514 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 ZNF829Q3KNS6 432 aaPredicted RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 CRTC2Q53ET0 693 aaPredicted RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 YOD1Q5VVQ6 348 aaPredicted RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 SLCO6A1Q86UG4 719 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 CDH24Q86UP0 819 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 IER2Q9BTL4 223 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 ST14Q9Y5Y6 855 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 GMEB1Q9Y692 573 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 SOX1O00570 391 aaPredicted RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 RNF13O43567 381 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 CLPXO76031 633 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 PNMTP11086 282 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 FOXN2P32314 431 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 RAB8AP61006 207 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 ACTA2P62736 377 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 ACTG2P63267 376 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 LCTLQ6UWM7 567 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 IQCHQ86VS3 1027 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 UBALD2Q8IYN6 164 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 ZNF101Q8IZC7 436 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 RBM15BQ8NDT2 890 aaKnown RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 ELP5Q8TE02 316 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 MED28Q9H204 178 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 CDH20Q9HBT6 801 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 POT1Q9NUX5 634 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 RDH8Q9NYR8 311 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 OR6C2Q9NZP2 312 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 LAMP5Q9UJQ1 280 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 CHD2O14647 1828 aaKnown RBP11.5□□□□□ -0.57
NEK9-210ENST00000557026 A0A0G2JPF8 293 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 A0A1B0GTW7 788 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 HNRNPCL3B7ZW38 293 aa11.5□□□□□ -0.57
NEK9-210ENST00000557026 MID1O15344 667 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms