RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 CSTF1Q05048 431 aaKnown RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 GFPT1Q06210 699 aaPredicted RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 SULT2A1Q06520 285 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 NME3Q13232 169 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 PIGHQ14442 188 aaPredicted RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 E2F5Q15329 346 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 DPYSL2Q16555 572 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 HNRNPA1L2Q32P51 320 aaKnown RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 KCNT1Q5JUK3 1230 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 SPDYCQ5MJ68 293 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 EOGTQ5NDL2 527 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 RABGAP1LQ5R372 815 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 INTS11Q5TA45 600 aaKnown RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 FAM72AQ5TYM5 149 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 FAM72DQ6L9T8 149 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 DNAJC24Q6P3W2 148 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 TMEM81Q6P7N7 255 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 TSSK4Q6SA08 328 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 TAOK1Q7L7X3 1001 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 LINGO2Q7L985 606 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 SLFN11Q7Z7L1 901 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 FAM72BQ86X60 149 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 VSIG1Q86XK7 387 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 APCDD1Q8J025 514 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 LGI2Q8N0V4 545 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 UMODL1-AS1Q8N2C9 162 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 DCAF4L2Q8NA75 395 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 NAXEQ8NCW5 288 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 OR13A1Q8NGR1 328 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 ABTB1Q969K4 478 aaPredicted RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 ZNF653Q96CK0 615 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 FAF2Q96CS3 445 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 ARHGEF26Q96DR7 871 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 CHP1Q99653 195 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 NCAPGQ9BPX3 1015 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 FEM1AQ9BSK4 669 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 NUF2Q9BZD4 464 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 LRRC19Q9H756 370 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 NHEJ1Q9H9Q4 299 aaPredicted RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 PREBQ9HCU5 417 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 MRPL47Q9HD33 250 aaKnown RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 UVRAGQ9P2Y5 699 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 CNOT8Q9UFF9 292 aaKnown RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 OR12D3Q9UGF7 316 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 SLC12A6Q9UHW9 1150 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 LCMT1Q9UIC8 334 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 POU2F3Q9UKI9 436 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 VANGL2Q9ULK5 521 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 TCF19Q9Y242 345 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 AKAP13Q12802 2813 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 LRP4O75096 1905 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 EPG5Q9HCE0 2579 aa3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 ZFC3H1O60293 1989 aaKnown RBP3.91□□□□□ -1.78
SOX9-AS1-214ENST00000540802 ASXL3Q9C0F0 2248 aa3.9□□□□□ -1.78
SOX9-AS1-214ENST00000540802 IGHV1OR15-9A0A0B4J2B8 117 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 A0A0D9SEW6 157 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 GOLGA6L9A6NEM1 432 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 TTC36A6NLP5 189 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 WASH3PC4AMC7 463 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ALOX15BO15296 676 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 LRP3O75074 770 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 SLC22A3O75751 556 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 MT-CYBP00156 380 aaPredicted RBP3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 AMBPP02760 352 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ATP5BP06576 529 aaKnown RBP3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 H2AFZP0C0S5 128 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 CDH1P12830 882 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 TCF4P15884 667 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 IL4RP24394 825 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 PSMA2P25787 234 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 MIPP30301 263 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 CSKP41240 450 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ARF5P84085 180 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 CDH18Q13634 790 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 DPYSQ14117 519 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 TAZQ16635 292 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 CA9Q16790 459 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 CDO1Q16878 200 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ERMARDQ5T6L9 678 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 C9orf64Q5T6V5 341 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 HIST2H2BCQ6DN03 193 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 TXNRD3NBQ6F5E7 133 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 DCUN1D2Q6PH85 259 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 H2AFVQ71UI9 128 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ASCL5Q7RTU5 278 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 VPS36Q86VN1 386 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 TMEM219Q86XT9 240 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ARMC8Q8IUR7 673 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ARHGAP12Q8IWW6 846 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ODF3L1Q8IXM7 274 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 CCDC170Q8IYT3 715 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 PYROXD2Q8N2H3 581 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ZCCHC9Q8N567 271 aaKnown RBP3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 RTL3Q8N8U3 475 aaKnown RBP3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 TSTD1Q8NFU3 115 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 OR2T3Q8NH03 318 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 ZNF564Q8TBZ8 553 aaPredicted RBP3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 UCMAQ8WVF2 138 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 TEKT4Q8WW24 435 aa3.9□□□□□ -1.79
SOX9-AS1-214ENST00000540802 RFFLQ8WZ73 363 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms