RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 SETDB1Q15047 1291 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 INAQ16352 499 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 PAGE2BQ5JRK9 111 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 ACER2Q5QJU3 275 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 FCRLBQ6BAA4 426 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 H3F3CQ6NXT2 135 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 RPUSD3Q6P087 351 aaKnown RBP8.29□□□□□ -1.08
CHD4-204ENST00000535810 TRIM40Q6P9F5 258 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 ABHD17CQ6PCB6 329 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 SCUBE1Q8IWY4 988 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 BEST3Q8N1M1 668 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 ST6GALNAC3Q8NDV1 305 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 OR2L5Q8NG80 312 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 M1APQ8TC57 530 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 GRHL3Q8TE85 626 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 FAR1Q8WVX9 515 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 SLC44A1Q8WWI5 657 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 ISL2Q96A47 359 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 ITPKCQ96DU7 683 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 MAGEB10Q96LZ2 347 aaPredicted RBP8.29□□□□□ -1.08
CHD4-204ENST00000535810 QRFPRQ96P65 431 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 TAAR6Q96RI8 345 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 PAFAH2Q99487 392 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 NPAS2Q99743 824 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 SLX1AQ9BQ83 275 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 NPLQ9BXD5 320 aaPredicted RBP8.29□□□□□ -1.08
CHD4-204ENST00000535810 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHD4-204ENST00000535810 ZFAND3Q9H8U3 227 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 KCNK13Q9HB14 408 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 STMN3Q9NZ72 180 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 OPTCQ9UBM4 332 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 CLDN16Q9Y5I7 305 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 CELSR2Q9HCU4 2923 aa8.29□□□□□ -1.08
CHD4-204ENST00000535810 A0A088AWK7 358 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 SAGE2PA6NJ88 616 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 B3GALT2O43825 422 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 MAN1A2O60476 641 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 INHBAP08476 426 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 GFAPP14136 432 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 EPB42P16452 691 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 POU3F2P20265 443 aaPredicted RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 ZNF10P21506 573 aaPredicted RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 ELAVL4P26378 380 aaKnown RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 HPDP32754 393 aaPredicted RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 MSH2P43246 934 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 HNRNPFP52597 415 aaKnown RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 ALDH18A1P54886 795 aaKnown RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 MTTPP55157 894 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 WDR4P57081 412 aaKnown RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 RAB38P57729 211 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 ACAP2Q15057 778 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 HIST2H2ACQ16777 129 aaPredicted RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 PFKFB4Q16877 469 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 HIST2H2AA3Q6FI13 130 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 FAM180AQ6UWF9 173 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 CRLF3Q8IUI8 442 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 IFT20Q8IY31 132 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 LAS2Q8IYD9 372 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 LGI4Q8N135 537 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 PLD6Q8N2A8 252 aaKnown RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 KIF2BQ8N4N8 673 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 SLC5A8Q8N695 610 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 BCORP1Q8N888 145 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 FAM47BQ8NA70 645 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 TMEM52Q8NDY8 209 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 OR7G3Q8NG95 312 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 ELP5Q8TE02 316 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 ADAMTS18Q8TE60 1221 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 ZNF473Q8WTR7 871 aaKnown RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 UBE2E3Q969T4 207 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 ZNF354BQ96LW1 612 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 KCNC2Q96PR1 638 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 F2RL3Q96RI0 385 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 SERINC2Q96SA4 455 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 CSF3RQ99062 836 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 MS4A8Q9BY19 250 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 VPS11Q9H270 941 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 ACBD3Q9H3P7 528 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 NECTIN3Q9NQS3 549 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 PRDM7Q9NQW5 492 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 OLAHQ9NV23 265 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 MMACHCQ9Y4U1 282 aa8.28□□□□□ -1.08
CHD4-204ENST00000535810 SETD2Q9BYW2 2564 aaPredicted RBP8.28□□□□□ -1.08
CHD4-204ENST00000535810 DIDO1Q9BTC0 2240 aaKnown RBP8.27□□□□□ -1.08
CHD4-204ENST00000535810 ZGRF1Q86YA3 2104 aa8.27□□□□□ -1.08
CHD4-204ENST00000535810 LRRC14BA6NHZ5 514 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 CYR61O00622 381 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 PRAMEF2O60811 474 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 MYO1DO94832 1006 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 SCELO95171 688 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 PCNAP12004 261 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 EDN3P14138 238 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 TNFRSF8P28908 595 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 PPP2R1BP30154 601 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 SERPINB1P30740 379 aa8.27□□□□□ -1.09
CHD4-204ENST00000535810 LIM2P55344 173 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 1428.3 ms