RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	BBS4	Q96RK4	519 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	APOL4	Q9BPW4	351 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	SORBS1	Q9BX66	1292 aa	Known RBP	10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	ADNP	Q9H2P0	1102 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	SRMS	Q9H3Y6	488 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	RIBC2	Q9H4K1	309 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	CACYBP	Q9HB71	228 aa	Known RBP	10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	FGF22	Q9HCT0	170 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	TRPV5	Q9NQA5	729 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	PRDM8	Q9NQV8	689 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	SEMA3G	Q9NS98	782 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	ACSL6	Q9UKU0	697 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	ICK	Q9UPZ9	632 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	WDR37	Q9Y2I8	494 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	FAM32A	Q9Y421	112 aa	Known RBP	10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	MAP4K5	Q9Y4K4	846 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	PCDHGA2	Q9Y5H1	932 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	SNX5	Q9Y5X3	404 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	COMMD3-BMI1	R4GMX3	469 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006		U3KQV3	271 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	FAM186A	A6NE01	2351 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	GOLGA4	Q13439	2230 aa	Known RBP	10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	DMXL1	Q9Y485	3027 aa		10.27	□□□□□ -0.77
SPIDR-222	ENST00000524006	SCN3A	Q9NY46	2000 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006		A0A1W2PQF6	199 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	C2CD4D	B7Z1M9	353 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	RTCA	O00442	366 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	TOR1B	O14657	336 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	BCKDK	O14874	412 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	ERI3	O43414	337 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	AHCYL1	O43865	530 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	TBX19	O60806	448 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	SCN2B	O60939	215 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	UGT2B11	O75310	529 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	BMP10	O95393	424 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	C9	P02748	559 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	GNAO1	P09471	354 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	ETFA	P13804	333 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	DRD2	P14416	443 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	GLUL	P15104	373 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	NDUFV2	P19404	249 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	AHR	P35869	848 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	MAGEA2	P43356	314 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	KHK	P50053	298 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	PLA2G16	P53816	162 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	CLDN2	P57739	230 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	YPEL5	P62699	121 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	CDK6	Q00534	326 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	SPIB	Q01892	262 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	TCEA2	Q15560	299 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	MLF2	Q15773	248 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	NKG7	Q16617	165 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	PRRT3	Q5FWE3	981 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	RBM48	Q5RL73	367 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR4C11	Q6IEV9	310 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	BHLHB9	Q6PI77	547 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC30A9	Q6PML9	568 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	VN1R5	Q7Z5H4	357 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	THAP5	Q7Z6K1	395 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	GALNT10	Q86SR1	603 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	AMIGO1	Q86WK6	493 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	TAGAP	Q8N103	731 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	TMEM145	Q8NBT3	493 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR10Q1	Q8NGQ4	319 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	GEMIN6	Q8WXD5	167 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR1E3	Q8WZA6	343 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	FAM3C	Q92520	227 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	EZH1	Q92800	747 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	FAM131C	Q96AQ9	280 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	DGCR14	Q96DF8	476 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	PDXP	Q96GD0	296 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	SLC35G5	Q96KT7	338 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	MRGPRX1	Q96LB2	322 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	KCNC2	Q96PR1	638 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	ZNF347	Q96SE7	839 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	C17orf62	Q9BQA9	187 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	DPH7	Q9BTV6	452 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	DOHH	Q9BU89	302 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	GABARAPL1	Q9H0R8	117 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	SMURF2	Q9HAU4	748 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	IL1RAP	Q9NPH3	570 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	KRT84	Q9NSB2	600 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	LYAR	Q9NX58	379 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	THUMPD1	Q9NXG2	353 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	OR6C2	Q9NZP2	312 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	TAAR2	Q9P1P5	351 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	MMP17	Q9ULZ9	603 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	BTBD3	Q9Y2F9	522 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	GMEB1	Q9Y692	573 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	DGKB	Q9Y6T7	804 aa		10.26	□□□□□ -0.77
SPIDR-222	ENST00000524006	CACNA1A	O00555	2505 aa		10.25	□□□□□ -0.77
SPIDR-222	ENST00000524006	SCN2A	Q99250	2005 aa		10.25	□□□□□ -0.77
SPIDR-222	ENST00000524006		A0A1W2PPV9	198 aa		10.25	□□□□□ -0.77
SPIDR-222	ENST00000524006	GSAP	A4D1B5	854 aa		10.25	□□□□□ -0.77
SPIDR-222	ENST00000524006	EME2	A4GXA9	379 aa	Predicted RBP	10.25	□□□□□ -0.77
SPIDR-222	ENST00000524006	PLOD2	O00469	737 aa		10.25	□□□□□ -0.77
SPIDR-222	ENST00000524006	TNFRSF10C	O14798	259 aa		10.25	□□□□□ -0.77
SPIDR-222	ENST00000524006	GFRA3	O60609	400 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms