RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 OTCP00480 354 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 BIKQ13323 160 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 DDX39BQ13838 428 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 SERTAD2Q14140 314 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 CPSF6Q16630 551 aaKnown RBP eCLIP19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 OR4C11Q6IEV9 310 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 SHISA5Q8N114 240 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 HORMAD2Q8N7B1 307 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 OR1N1Q8NGS0 311 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 ELP5Q8TE02 316 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 BARD1Q99728 777 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 C1QTNF3Q9BXJ4 246 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.99■□□□□ 0.793e-13■□□□□ 9.9
UBE2D3-229ENST00000510129 DCDC2Q9UHG0 476 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 PHF11Q9UIL8 331 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 CPAMD8Q8IZJ3 1885 aa19.99■□□□□ 0.79
UBE2D3-229ENST00000510129 WDPCPO95876 746 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 TLX1P31314 330 aaPredicted RBP19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 GGTA1PQ4G0N0 100 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 FAM180AQ6UWF9 173 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 SLC22A9Q8IVM8 553 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 ZCCHC7Q8N3Z6 543 aaKnown RBP19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 UBLCP1Q8WVY7 318 aaPredicted RBP19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 MTERF1Q99551 399 aaKnown RBP19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 SERPINI1Q99574 410 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 ADAP2Q9NPF8 381 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 NECTIN3Q9NQS3 549 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 ASF1BQ9NVP2 202 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 STK38LQ9Y2H1 464 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 CSAG2Q9Y5P2 127 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 SCN2AQ99250 2005 aa19.98■□□□□ 0.79
UBE2D3-229ENST00000510129 LRRC14BA6NHZ5 514 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 RPS17P08708 135 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 PPP2R1BP30154 601 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 HERVK_113P63132 956 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 STX4Q12846 297 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 ELOAQ14241 798 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 RASA2Q15283 850 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 ZRSR2Q15696 482 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 PRR30Q53SZ7 412 aaPredicted RBP19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 TTC19Q6DKK2 380 aaPredicted RBP19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 UBE3DQ7Z6J8 389 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 TMEM132CQ8N3T6 1108 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 FAM26EQ8N5C1 309 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 FAM47BQ8NA70 645 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 LRRN4CLQ8ND94 238 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 B3GNT7Q8NFL0 401 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 MYRIPQ8NFW9 859 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 UTP23Q9BRU9 249 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 ERVK-6Q9BXR3 956 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 EPB41L4BQ9H329 900 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 OR51B5Q9H339 312 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 KCMF1Q9P0J7 381 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 PPIEQ9UNP9 301 aaKnown RBP19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 RNF11Q9Y3C5 154 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 PCDHGB6Q9Y5F9 930 aa19.97■□□□□ 0.79
UBE2D3-229ENST00000510129 A8MT66 165 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 TCP11X1B4DZS4 312 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 OR7A17O14581 309 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 SEMA3DO95025 777 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 CPN2P22792 545 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 CLCN2P51788 898 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 NAA20P61599 178 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 IFT88Q13099 833 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 ELAVL1Q15717 326 aaKnown RBP19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 FRG2Q64ET8 278 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 MILR1Q7Z6M3 343 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 RPS19BP1Q86WX3 136 aaKnown RBP19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 TDRPQ86YL5 185 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 GSPT2Q8IYD1 628 aaKnown RBP19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 TMEM151AQ8N4L1 468 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 BCORP1Q8N888 145 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 CATSPER1Q8NEC5 780 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 WDR20Q8TBZ3 569 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 DAZLQ92904 295 aaKnown RBP19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 CCDC126Q96EE4 140 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 VMP1Q96GC9 406 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 FRG2BQ96QU4 278 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 LYARQ9NX58 379 aaKnown RBP19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 PLA2G3Q9NZ20 509 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 AHSPQ9NZD4 102 aa19.96■□□□□ 0.79
UBE2D3-229ENST00000510129 FCHO1O14526 889 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 ZNF500O60304 480 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 PRAMEF2O60811 474 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 MYO1DO94832 1006 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 ATP5F1P24539 256 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 BUD31P41223 144 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 RPS13P62277 151 aaKnown RBP19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 SLAMF1Q13291 335 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 UBAP2LQ14157 1087 aaKnown RBP19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 ZNF793Q6ZN11 406 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 GPR180Q86V85 440 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 NUDT13Q86X67 352 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 CRLF3Q8IUI8 442 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 BEST3Q8N1M1 668 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 NFAM1Q8NET5 270 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 OR52B6Q8NGF0 335 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 ZNF483Q8TF39 744 aaPredicted RBP19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 FAR1Q8WVX9 515 aa19.95■□□□□ 0.78
UBE2D3-229ENST00000510129 TANKQ92844 425 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms