RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DEPDC1Q5TB30 811 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 FRG2Q64ET8 278 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-206ENST00000465877 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 ZYG11AQ6WRX3 759 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 SCUBE1Q8IWY4 988 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 ACOT4Q8N9L9 421 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 TRPC4APQ8TEL6 797 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 PSMF1Q92530 271 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 PNPLA2Q96AD5 504 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 L3HYPDHQ96EM0 354 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 APOPT1Q96IL0 206 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 MAGEB10Q96LZ2 347 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-206ENST00000465877 FRG2BQ96QU4 278 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 ZNF382Q96SR6 550 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 ZNF717Q9BY31 904 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-206ENST00000465877 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 EPS8L2Q9H6S3 715 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 LYRM4Q9HD34 91 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 NECTIN3Q9NQS3 549 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 PRTFDC1Q9NRG1 225 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 MKS1Q9NXB0 559 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 LUZP4Q9P127 313 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 PTGFRNQ9P2B2 879 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 TRPS1Q9UHF7 1281 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 LGALS13Q9UHV8 139 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 RAB21Q9UL25 225 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 PPT2Q9UMR5 302 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 CSAG2Q9Y5P2 127 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 TLDC2A0PJX2 215 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 SAGE2PA6NJ88 616 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 G3V2L1 256 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 J3QKU1 62 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 FOXE1O00358 373 aaPredicted RBP12.1□□□□□ -0.47
COL5A1-206ENST00000465877 PPP6CO00743 305 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 PLIN3O60664 434 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 SEMA3DO95025 777 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 MYL2P10916 166 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 ICAM2P13598 275 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 IMPDH1P20839 514 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 CCT5P48643 541 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 NEK2P51955 445 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 ARFIP1P53367 373 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 PRKAA2P54646 552 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 HSD17B7P56937 341 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 TNFRSF17Q02223 184 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 SLC18A2Q05940 514 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 IFT88Q13099 833 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 SLC13A2Q13183 592 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 MFAP5Q13361 173 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 CUL3Q13618 768 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 EXT1Q16394 746 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 AP5B1Q2VPB7 878 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 CCDC153Q494R4 210 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 UNC50Q53HI1 259 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 FAM219BQ5XKK7 198 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 TTC19Q6DKK2 380 aaPredicted RBP12.1□□□□□ -0.47
COL5A1-206ENST00000465877 OR4C11Q6IEV9 310 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 ISLR2Q6UXK2 745 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 LINC00696Q6ZRV3 163 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 MILR1Q7Z6M3 343 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 TRABD2AQ86V40 505 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 NUDT13Q86X67 352 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 ZNF595Q8IYB9 648 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 EFCAB3Q8N7B9 438 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 Q8NA96 180 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 ARMC2Q8NEN0 867 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 RDH11Q8TC12 318 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 RGMAQ96B86 450 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 CCDC126Q96EE4 140 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 MAPKAP1Q9BPZ7 522 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 ELOVL6Q9H5J4 265 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 ZNF225Q9UK10 706 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 PLAAQ9Y263 795 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 STK38LQ9Y2H1 464 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 CLDN16Q9Y5I7 305 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 SPACA6W5XKT8 324 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 FLNCQ14315 2725 aa12.1□□□□□ -0.47
COL5A1-206ENST00000465877 SYNDIG1LA6NDD5 238 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 CYR61O00622 381 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 CLDN4O14493 209 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 OR4F21O95013 312 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 PTX3P26022 381 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 SLC26A5P58743 744 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 ACTN3Q08043 901 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 LCP2Q13094 533 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 TCHHL1Q5QJ38 904 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 GPRIN3Q6ZVF9 776 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 CLNKQ7Z7G1 428 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 SRRM1Q8IYB3 904 aaKnown RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 ZCCHC7Q8N3Z6 543 aaKnown RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 ZADH2Q8N4Q0 377 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 CCDC63Q8NA47 563 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 MTFMTQ96DP5 389 aaKnown RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 SERPINI1Q99574 410 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 ROPN1BQ9BZX4 212 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 IQCGQ9H095 443 aaKnown RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 ILKAPQ9H0C8 392 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms