RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CLNKQ7Z7G1 428 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 SULF2Q8IWU5 870 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 PDPRQ8NCN5 879 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 AGAP11Q8TF27 550 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 KIAA1191Q96A73 305 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 WDR34Q96EX3 536 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 GRHL1Q9NZI5 618 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 ZNF223Q9UK11 482 aaPredicted RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 PTBP2Q9UKA9 531 aaKnown RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 ZNF490Q9ULM2 529 aaPredicted RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 DAPP1Q9UN19 280 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 PRRG2O14669 202 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 PEX1O43933 1283 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 ZFAND5O76080 213 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 IFNA16P05015 189 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 SNRPB2P08579 225 aaKnown RBP19.6■□□□□ 0.73
VSX1-206ENST00000444511 GSTA2P09210 222 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 PTGER4P35408 488 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 RFC3P40938 356 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 SSR4P51571 173 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 IRF8Q02556 426 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 BMPR2Q13873 1038 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 ELAVL1Q15717 326 aaKnown RBP19.6■□□□□ 0.73
VSX1-206ENST00000444511 EID3Q8N140 333 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 TMEM132CQ8N3T6 1108 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 UBXN10Q96LJ8 280 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 F2RL3Q96RI0 385 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 CSF3RQ99062 836 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 ROGDIQ9GZN7 287 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 ERVK-11Q9UQG0 969 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 YARS2Q9Y2Z4 477 aaKnown RBP19.6■□□□□ 0.73
VSX1-206ENST00000444511 CLDN16Q9Y5I7 305 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 CLCA3PQ9Y6N3 262 aa19.6■□□□□ 0.73
VSX1-206ENST00000444511 CYR61O00622 381 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 CTNSO60931 367 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 CLDN14O95500 239 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 TFEBP19484 476 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 CD22P20273 847 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 PTGER1P34995 402 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 KCNC1P48547 511 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 GPR143P51810 404 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 GPX6P59796 221 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 C2orf54Q08AI8 447 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 STX4Q12846 297 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 CHIT1Q13231 466 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 SLMAPQ14BN4 828 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 EFTUD2Q15029 972 aaKnown RBP eCLIP19.59■□□□□ 0.73
VSX1-206ENST00000444511 GRTP1Q5TC63 336 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 RAPH1Q70E73 1250 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 LRRC70Q7Z2Q7 622 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 GDF7Q7Z4P5 450 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 MDGA2Q7Z553 956 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 DOLPP1Q86YN1 238 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 CHERPQ8IWX8 916 aaKnown RBP19.59■□□□□ 0.73
VSX1-206ENST00000444511 PPM1NQ8N819 430 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 SRFBP1Q8NEF9 429 aaKnown RBP19.59■□□□□ 0.73
VSX1-206ENST00000444511 STAG3L4Q8TBR4 150 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 KCNC2Q96PR1 638 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 PHF12Q96QT6 1004 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 CD244Q9BZW8 370 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 ALG9Q9H6U8 611 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 TIMMDC1Q9NPL8 285 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 UTP11Q9Y3A2 253 aaKnown RBP19.59■□□□□ 0.73
VSX1-206ENST00000444511 ASB1Q9Y576 335 aa19.59■□□□□ 0.73
VSX1-206ENST00000444511 MSH2P43246 934 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 PLTPP55058 493 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 GPR85P60893 370 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 TBCCQ15814 346 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 C3P1Q6ZMU1 363 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 NCCRP1Q6ZVX7 275 aaPredicted RBP19.58■□□□□ 0.72
VSX1-206ENST00000444511 CCDC25Q86WR0 208 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 DAZLQ92904 295 aaKnown RBP19.58■□□□□ 0.72
VSX1-206ENST00000444511 UBE2E3Q969T4 207 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 MTFMTQ96DP5 389 aaKnown RBP19.58■□□□□ 0.72
VSX1-206ENST00000444511 PRDM7Q9NQW5 492 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 KCMF1Q9P0J7 381 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 LRBAP50851 2863 aa19.58■□□□□ 0.72
VSX1-206ENST00000444511 MYOCOSA0A1B0GUC4 107 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 A8MVJ9 347 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 SUPT3HB4E1H0 165 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 E9PLN8 166 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 HS6ST1O60243 411 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 PRKNO60260 465 aaPredicted RBP19.57■□□□□ 0.72
VSX1-206ENST00000444511 CDC40O60508 579 aaKnown RBP eCLIP19.57■□□□□ 0.72
VSX1-206ENST00000444511 SUPT3HO75486 399 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 OR2J2O76002 312 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 C1QAP02745 245 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 TUBB4AP04350 444 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 EPORP19235 508 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 PTGS2P35354 604 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 CAV1Q03135 178 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 KBTBD12Q3ZCT8 623 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 HSDL2Q6YN16 418 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 C16orf47Q6ZP98 133 aaPredicted RBP19.57■□□□□ 0.72
VSX1-206ENST00000444511 FGD2Q7Z6J4 655 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 TBC1D1Q86TI0 1168 aaPredicted RBP19.57■□□□□ 0.72
VSX1-206ENST00000444511 GPALPP1Q8IXQ4 340 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 C16orf52Q8NHV5 167 aa19.57■□□□□ 0.72
VSX1-206ENST00000444511 PHF10Q8WUB8 498 aaKnown RBP19.57■□□□□ 0.72
VSX1-206ENST00000444511 VKORC1Q9BQB6 163 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms