RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 OR51B5Q9H339 312 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 CALHM2Q9HA72 323 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 WRAP73Q9P2S5 460 aaPredicted RBP8.83□□□□□ -1
LIMCH1-202ENST00000381753 DUSP13Q9UII6 198 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 NAALAD2Q9Y3Q0 740 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 CYB5BO43169 146 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 ZNF749O43361 778 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 TIMM8AO60220 97 aaPredicted RBP8.83□□□□□ -1
LIMCH1-202ENST00000381753 ITGA5P08648 1049 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 MNDAP41218 407 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 CCNIQ14094 377 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 RELL1Q8IUW5 271 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 ZNF619Q8N2I2 560 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 RBM24Q9BX46 236 aaKnown RBP8.83□□□□□ -1
LIMCH1-202ENST00000381753 C12orf49Q9H741 205 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 VIPAS39Q9H9C1 493 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 RAB9BQ9NP90 201 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 CD93Q9NPY3 652 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 CLN6Q9NWW5 311 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 CYTH4Q9UIA0 394 aa8.83□□□□□ -1
LIMCH1-202ENST00000381753 CD2P06729 351 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 C1SP09871 688 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 HNRNPLP14866 589 aaKnown RBP eCLIP8.82□□□□□ -1
LIMCH1-202ENST00000381753 PVRP15151 417 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 RHDQ02161 417 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 SLC10A1Q14973 349 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 NOMO1Q15155 1222 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 PRAMEF20Q5VT98 475 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 KCTD11Q693B1 232 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 OR52E8Q6IFG1 317 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 ZNF550Q7Z398 422 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 UEVLDQ8IX04 471 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 MDM1Q8TC05 714 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 LRRC20Q8TCA0 184 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 DOK4Q8TEW6 326 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 BIRC7Q96CA5 298 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 FBXL8Q96CD0 374 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 COQ7Q99807 217 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 P2RX2Q9UBL9 471 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 TFR2Q9UP52 801 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 A0A1W2PPC4 97 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 VNN1O95497 513 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 RPA4Q13156 261 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 VEZF1Q14119 521 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 QPCTQ16769 361 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 TBCELQ5QJ74 424 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 DPPA4Q7L190 304 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 NLRP14Q86W24 1093 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 PLD5Q8N7P1 536 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 VPS29Q9UBQ0 182 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 IKZF3Q9UKT9 509 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 CACNA1GO43497 2377 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 PORP16435 677 aaPredicted RBP8.82□□□□□ -1
LIMCH1-202ENST00000381753 CHN2P52757 468 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 TAS2R40P59535 323 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 HTR4Q13639 388 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 C5orf22Q49AR2 442 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 C19orf18Q8NEA5 215 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 H1FXQ92522 213 aaKnown RBP8.82□□□□□ -1
LIMCH1-202ENST00000381753 FBXL20Q96IG2 436 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 GDF15Q99988 308 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 FAM237BA0A1B0GVD1 139 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 TRABD2BA6NFA1 517 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 RNASET2O00584 256 aaKnown RBP8.82□□□□□ -1
LIMCH1-202ENST00000381753 IFNA6P05013 189 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 EPHA3P29320 983 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 SFT2D3Q587I9 215 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 FIGNQ5HY92 759 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 UBAP2Q5T6F2 1119 aaKnown RBP8.82□□□□□ -1
LIMCH1-202ENST00000381753 TMEM110Q86TL2 294 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 CISD2Q8N5K1 135 aaKnown RBP8.82□□□□□ -1
LIMCH1-202ENST00000381753 ENDOVQ8N8Q3 282 aaKnown RBP8.82□□□□□ -1
LIMCH1-202ENST00000381753 DPF1Q92782 380 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 TRAPPC9Q96Q05 1148 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 PCED1AQ9H1Q7 454 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 CWH43Q9H720 699 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 FSCN3Q9NQT6 498 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 WIF1Q9Y5W5 379 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 SNX13Q9Y5W8 968 aa8.82□□□□□ -1
LIMCH1-202ENST00000381753 SMAD7O15105 426 aaKnown RBP8.81□□□□□ -1
LIMCH1-202ENST00000381753 SURF4O15260 269 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 ITGA2BP08514 1039 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 UROSP10746 265 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 CHN1P15882 459 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 NMBRP28336 390 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 GRK5P34947 590 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 SPINT3P49223 89 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 RAB35Q15286 201 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 ARMCX4Q5H9R4 360 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 SLC22A10Q63ZE4 541 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 METTL25Q8N6Q8 603 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 CADM4Q8NFZ8 388 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 MRGPRX1Q96LB2 322 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 CHRDQ9H2X0 955 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 TNFRSF19Q9NS68 423 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 REV1Q9UBZ9 1251 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 A0A075B6Q4 140 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 TEX13CA0A0J9YWL9 993 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 CACNG3O60359 315 aa8.81□□□□□ -1
LIMCH1-202ENST00000381753 HCKP08631 526 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms