RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 GPR180Q86V85 440 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 TMEM132CQ8N3T6 1108 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 OR7A2PQ8NGA2 310 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 SLC7A5P2Q9GIP4 190 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 ACTR5Q9H9F9 607 aaPredicted RBP13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 MYNNQ9NPC7 610 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 FBXO8Q9NRD0 319 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 ENAMQ9NRM1 1142 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 KCMF1Q9P0J7 381 aa13.35□□□□□ -0.27
HERPUD1-203ENST00000379792 FAM227AF5H4B4 570 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 CHST10O43529 356 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 ZNF28P17035 718 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 ASMTP46597 345 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 AVPR1BP47901 424 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 ZFP36L2P47974 494 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 EMP3P54852 163 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 LIM2P55344 173 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 PGS1Q32NB8 556 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 FAM180BQ6P0A1 224 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 RIMKLAQ8IXN7 391 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 CA13Q8N1Q1 262 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 LIN37Q96GY3 246 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 TXLNGQ9NUQ3 528 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 C5AR2Q9P296 337 aa13.34□□□□□ -0.27
HERPUD1-203ENST00000379792 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 GABRR3A8MPY1 467 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 B4E171 279 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 DSCR3O14972 297 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 PGRMC2O15173 223 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 PROM1O43490 865 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 RRP9O43818 475 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 UBOX5O94941 541 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 NSA2O95478 260 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 CBX6O95503 412 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 AIFM1O95831 613 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 JMJD7P0C870 316 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 ITGAXP20702 1163 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 PRPS1L1P21108 318 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 JAK1P23458 1154 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 TSPAN7P41732 249 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 MRPL19P49406 292 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 POLR2JP52435 117 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 ARSFP54793 590 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 KLC1Q07866 573 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 UGT8Q16880 541 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 PRSS53Q2L4Q9 553 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 C3orf38Q5JPI3 329 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 NDUFAF5Q5TEU4 345 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 SNX32Q86XE0 403 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 FAM47BQ8NA70 645 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 VPS33AQ96AX1 596 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 CLIP3Q96DZ5 547 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 CSF3RQ99062 836 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 ZBTB18Q99592 522 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 YIPF2Q9BWQ6 316 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 RBCK1Q9BYM8 510 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 LYARQ9NX58 379 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 ANGPTL2Q9UKU9 493 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 DAPP1Q9UN19 280 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 B3GALT1Q9Y5Z6 326 aa13.33□□□□□ -0.28
HERPUD1-203ENST00000379792 A0A1B0GX78 115 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 FAM234BA2RU67 622 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 EBAG9O00559 213 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 PLD2O14939 933 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 COX7A2P14406 83 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 EFNA1P20827 205 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 CPN2P22792 545 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 ERV3-1Q14264 604 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 FAM174BQ3ZCQ3 159 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 SPANXN4Q5MJ08 99 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 BLOC1S3Q6QNY0 202 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 TICAM1Q8IUC6 712 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 COL26A1Q96A83 441 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 PEX11GQ96HA9 241 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 CLMPQ9H6B4 373 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 REEP4Q9H6H4 257 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 SH3BP4Q9P0V3 963 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 SRPK3Q9UPE1 567 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 SATB2Q9UPW6 733 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 KIAA0754O94854 1291 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 FURINP09958 794 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 LAMP1P11279 417 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 PIM1P11309 404 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 COX4I1P13073 169 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 CAPN3P20807 821 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 HPCAL1P37235 193 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 CPA2P48052 419 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 HNRNPFP52597 415 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 TRA2BP62995 288 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 PHC1P78364 1004 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 TIGD2Q4W5G0 525 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 ZNF385BQ569K4 471 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 RHBDD2Q6NTF9 364 aa13.32□□□□□ -0.28
HERPUD1-203ENST00000379792 BPHLQ86WA6 291 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms