RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 A8MUA0 341 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 SLC19A2O60779 497 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 SCELO95171 688 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 MTHFD2P13995 350 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 ALDH6A1Q02252 535 aaKnown RBP16.56■□□□□ 0.24
HDDC3-201ENST00000330334 SLC13A2Q13183 592 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 ELAVL1Q15717 326 aaKnown RBP16.56■□□□□ 0.24
HDDC3-201ENST00000330334 MAPKAPK3Q16644 382 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 FAM83EQ2M2I3 478 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 ZNF787Q6DD87 383 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 ADNP2Q6IQ32 1131 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 MED27Q6P2C8 311 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 Q6ZPB1 254 aaPredicted RBP16.56■□□□□ 0.24
HDDC3-201ENST00000330334 CEP128Q6ZU80 1094 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 CHSY3Q70JA7 882 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 UBE3DQ7Z6J8 389 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 SIAH3Q8IW03 269 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 TMEM132CQ8N3T6 1108 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 TMEM52Q8NDY8 209 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 TMEM125Q96AQ2 219 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 F2RL3Q96RI0 385 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 MS4A8Q9BY19 250 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 COPS7BQ9H9Q2 264 aaPredicted RBP16.56■□□□□ 0.24
HDDC3-201ENST00000330334 PNO1Q9NRX1 252 aaKnown RBP16.56■□□□□ 0.24
HDDC3-201ENST00000330334 OPTCQ9UBM4 332 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 SUCOQ9UBS9 1254 aaKnown RBP16.56■□□□□ 0.24
HDDC3-201ENST00000330334 VTI1BQ9UEU0 232 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 ENTPD4Q9Y227 616 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 TSC22D4Q9Y3Q8 395 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 MYO7BQ6PIF6 2116 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 TRGV8A0A0C4DH27 118 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 TRBV11-1A0A0K0K1C0 115 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 HMX2A2RU54 273 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 TGFBR3LH3BV60 316 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 WISP2O76076 250 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 C2P06681 752 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 EPB42P16452 691 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 CERS1P27544 350 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 MSH2P43246 934 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 HNRNPFP52597 415 aaKnown RBP16.55■□□□□ 0.24
HDDC3-201ENST00000330334 ARFIP1P53367 373 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 CASP6P55212 293 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 SLC7A5Q01650 507 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 ART3Q13508 389 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 ACAP2Q15057 778 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 C8orf74Q6P047 294 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 METTL2BQ6P1Q9 378 aaKnown RBP16.55■□□□□ 0.24
HDDC3-201ENST00000330334 RPTNQ6XPR3 784 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.55■□□□□ 0.24
HDDC3-201ENST00000330334 CENPLQ8N0S6 344 aaPredicted RBP16.55■□□□□ 0.24
HDDC3-201ENST00000330334 POGLUT1Q8NBL1 392 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 OR7G3Q8NG95 312 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 NXNL1Q96CM4 212 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 LRRC1Q9BTT6 524 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 FUT8Q9BYC5 575 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 TSPYL1Q9H0U9 437 aa16.55■□□□□ 0.24
HDDC3-201ENST00000330334 KLF2Q9Y5W3 355 aaPredicted RBP16.55■□□□□ 0.24
HDDC3-201ENST00000330334 SUPT3HB4E1H0 165 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 UBXN8O00124 270 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 CCL21O00585 134 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 ASNA1O43681 348 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 KLK8O60259 260 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 SUPT3HO75486 399 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 ZFAND5O76080 213 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 ATP5A1P25705 553 aaKnown RBP16.54■□□□□ 0.24
HDDC3-201ENST00000330334 PHBP35232 272 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 GMPRP36959 345 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 PIK3CBP42338 1070 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 SERTAD2Q14140 314 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-201ENST00000330334 WHAMMP3Q1A5X7 153 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 MROH9Q5TGP6 573 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 SPPL2CQ8IUH8 684 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 ACOT4Q8N9L9 421 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 FAM47BQ8NA70 645 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 MORN4Q8NDC4 146 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 ITLN2Q8WWU7 325 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-201ENST00000330334 DAZLQ92904 295 aaKnown RBP16.54■□□□□ 0.24
HDDC3-201ENST00000330334 EXT2Q93063 718 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 CMTM7Q96FZ5 175 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 CCDC77Q9BR77 488 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 ZNF223Q9UK11 482 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-201ENST00000330334 KLF13Q9Y2Y9 288 aaPredicted RBP16.54■□□□□ 0.24
HDDC3-201ENST00000330334 YARS2Q9Y2Z4 477 aaKnown RBP16.54■□□□□ 0.24
HDDC3-201ENST00000330334 CLCA3PQ9Y6N3 262 aa16.54■□□□□ 0.24
HDDC3-201ENST00000330334 ESYT3A0FGR9 886 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 KLRC4-KLRK1H3BQV0 150 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 UGDHO60701 494 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 KLHL2O95198 593 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 AGAP20933 346 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 HIST1H1TP22492 207 aaPredicted RBP16.53■□□□□ 0.24
HDDC3-201ENST00000330334 ST13P50502 369 aaKnown RBP16.53■□□□□ 0.24
HDDC3-201ENST00000330334 ALDH18A1P54886 795 aaKnown RBP16.53■□□□□ 0.24
HDDC3-201ENST00000330334 SRSF11Q05519 484 aaKnown RBP16.53■□□□□ 0.24
HDDC3-201ENST00000330334 BIKQ13323 160 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 AP5B1Q2VPB7 878 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 DEPDC1Q5TB30 811 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 LIPJQ5W064 366 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 GRHL2Q6ISB3 625 aa16.53■□□□□ 0.24
HDDC3-201ENST00000330334 ZNF793Q6ZN11 406 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms