RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 PSRC1Q6PGN9 363 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 P3H2Q8IVL5 708 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 OR5K2Q8NHB8 316 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 PROX1Q92786 737 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 ZNF717Q9BY31 904 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 PRDM8Q9NQV8 689 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 SNX11Q9Y5W9 270 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 ACVR2AP27037 513 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 C21orf33P30042 268 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 OPRD1P41143 372 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 TAS2R38P59533 333 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 HSPB3Q12988 150 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 DEPDC1Q5TB30 811 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 CEACAM20Q6UY09 585 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 BTLAQ7Z6A9 289 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 SLCO6A1Q86UG4 719 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 FAM20CQ8IXL6 584 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 OR4C15Q8NGM1 316 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 UTP15Q8TED0 518 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 HERVK_113Q902F9 699 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 RPL3LQ92901 407 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 GTPBP3Q969Y2 492 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 ALOXE3Q9BYJ1 711 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 OSGEPL1Q9H4B0 414 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 SERGEFQ9UGK8 458 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 WDR37Q9Y2I8 494 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 NINQ8N4C6 2090 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 DNAJB5O75953 348 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 GABARAPO95166 117 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 SERPIND1P05546 499 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 MANFP55145 182 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 DSTNP60981 165 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 OCA2Q04671 838 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 NR1D2Q14995 579 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 MICAQ29983 383 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 ADAMTSL4Q6UY14 1074 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 DSG4Q86SJ6 1040 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 P2RY8Q86VZ1 359 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 CCDC103Q8IW40 242 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 TM4SF18Q96CE8 201 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 MTERF3Q96E29 417 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 YIPF6Q96EC8 236 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 ZNF347Q96SE7 839 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 NLNQ9BYT8 704 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 DPP7Q9UHL4 492 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 SLC6A14Q9UN76 642 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 RWDD3Q9Y3V2 267 aa17.5■□□□□ 0.39
SHKBP1-201ENST00000291842 C2orf16Q68DN1 1984 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 TRBC2A0A5B9 178 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 SCAMP1O15126 338 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 PPM1DO15297 605 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 KRT75O95678 551 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 PSMD7P51665 324 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 NCS1P62166 190 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 GPM6BQ13491 265 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 ZNF630Q2M218 657 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 SYT6Q5T7P8 510 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 METRNLQ641Q3 311 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 Q6ZNX1 250 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 PRSS48Q7RTY5 328 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 NLGN4XQ8N0W4 816 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 HORMAD2Q8N7B1 307 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 RAB8BQ92930 207 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 EXOSC8Q96B26 276 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 CHFRQ96EP1 664 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 HDAC8Q9BY41 377 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 XKR8Q9H6D3 395 aa17.49■□□□□ 0.39
SHKBP1-201ENST00000291842 WASHC1A8K0Z3 465 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 E9PQ18 207 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 M0R3G1 203 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 SH3BP5O60239 455 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 PAK4O96013 591 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 BCHEP06276 602 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ARAFP10398 606 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 DDCP20711 480 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 UQCRC2P22695 453 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 BSGP35613 385 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 GGT2P36268 569 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 SLC19A1P41440 591 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ST13P50502 369 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ATP1A4Q13733 1029 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 SYT16Q17RD7 645 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 CRB2Q5IJ48 1285 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 WASH2PQ6VEQ5 465 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 CCDC80Q76M96 950 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ADCK2Q7Z695 626 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 AMER3Q8N944 861 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 AIF1LQ9BQI0 150 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 COPS4Q9BT78 406 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 MS4A8Q9BY19 250 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ARMC7Q9H6L4 198 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ACER3Q9NUN7 267 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 AHSPQ9NZD4 102 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ANGPT4Q9Y264 503 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 FAM227AF5H4B4 570 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 OR1F1O43749 312 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 FUCA1P04066 466 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 ACP5P13686 325 aa17.48■□□□□ 0.39
SHKBP1-201ENST00000291842 GJA4P35212 333 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms