RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, human

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDRT1-208	ENST00000630868	GTSE1	Q9NYZ3	720 aa		4.38	□□□□□ -1.71
CDRT1-208	ENST00000630868	RCC2	Q9P258	522 aa	Known RBP	4.38	□□□□□ -1.71
CDRT1-208	ENST00000630868	KLHL13	Q9P2N7	655 aa		4.38	□□□□□ -1.71
CDRT1-208	ENST00000630868	YIPF1	Q9Y548	306 aa		4.38	□□□□□ -1.71
CDRT1-208	ENST00000630868	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.38	□□□□□ -1.71
CDRT1-208	ENST00000630868	CIT	O14578	2027 aa		4.38	□□□□□ -1.71
CDRT1-208	ENST00000630868	COL6A6	A6NMZ7	2263 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	THADA	Q6YHU6	1953 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868		A0A1W2PPK0	400 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	WNT9B	O14905	357 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ANKRD28	O15084	1053 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	SPINT2	O43291	252 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZIC3	O60481	467 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	NOL3	O60936	208 aa	Known RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ATG13	O75143	517 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	PEX11A	O75192	247 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	OAZ2	O95190	189 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	PRAMEF12	O95522	483 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	CAVIN2	O95810	425 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ANKRD34C	P0C6C1	535 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	CCDC192	P0DO97	292 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	WT1	P19544	449 aa	Predicted RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	BDKRB2	P30411	391 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	CHRNA3	P32297	505 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	RPL9	P32969	192 aa	Known RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	NAMPT	P43490	491 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	RAD23B	P54727	409 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	MTCP1	P56278	107 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	CLDN20	P56880	219 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	GSDMD	P57764	484 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	CD81	P60033	236 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	DLK1	P80370	383 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	TWF1	Q12792	350 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	PNRC1	Q12796	327 aa	Predicted RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	PLD1	Q13393	1074 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	GAMT	Q14353	236 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	KARS	Q15046	597 aa	Known RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	CTU2	Q2VPK5	515 aa	Known RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ITPRIPL2	Q3MIP1	535 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	FAM174B	Q3ZCQ3	159 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	DCAF6	Q58WW2	860 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	STXBP5	Q5T5C0	1151 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	MFSD12	Q6NUT3	480 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	BLOC1S2	Q6QNY1	142 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZNF793	Q6ZN11	406 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	NRARP	Q7Z6K4	114 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	PIP4P1	Q86T03	277 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	EXOC3L1	Q86VI1	746 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZBTB8OS	Q8IWT0	167 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	KDM8	Q8N371	416 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	GCSAM	Q8N6F7	178 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	TTC9B	Q8N6N2	239 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZNF611	Q8N823	705 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ENGASE	Q8NFI3	743 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	SLC35F5	Q8WV83	523 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	PSMG2	Q969U7	264 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	SARAF	Q96BY9	339 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	SGF29	Q96ES7	293 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	EEF2KMT	Q96G04	330 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ZFYVE19	Q96K21	471 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	CRACR2A	Q9BSW2	395 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	DPH5	Q9H2P9	285 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	HHATL	Q9HCP6	504 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	TMEM9B	Q9NQ34	198 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	HPS4	Q9NQG7	708 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	POLE3	Q9NRF9	147 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	SLC35D1	Q9NTN3	355 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	TMEM45A	Q9NWC5	275 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	ASB3	Q9Y575	518 aa		4.37	□□□□□ -1.71
CDRT1-208	ENST00000630868	PTPRD	P23468	1912 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	DENND4C	Q5VZ89	1909 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	MGA	Q8IWI9	3026 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	HECTD1	Q9ULT8	2610 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	TENM4	Q6N022	2769 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	C2orf92	A0A1B0GVN3	265 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868		A0A1W2PP11	408 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	TLR4	O00206	839 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	HS3ST1	O14792	307 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	KCNN4	O15554	427 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	FLRT2	O43155	660 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	HSPA12A	O43301	675 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	PRAF2	O60831	178 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	CRCP	O75575	148 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	RHOBTB1	O94844	696 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	AKR7A3	O95154	331 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	BAG4	O95429	457 aa	Known RBP	4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	APBB3	O95704	486 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	FGF19	O95750	216 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	MT-ATP6	P00846	226 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	SERPING1	P05155	500 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	PROZ	P22891	400 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	HTR6	P50406	440 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	SMS	P52788	366 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	MFAP3	P55082	362 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	HNRNPH2	P55795	449 aa	Known RBP	4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	ARPP19	P56211	112 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	P2RX3	P56373	397 aa		4.36	□□□□□ -1.71
CDRT1-208	ENST00000630868	SELENOV	P59797	346 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms