RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 AIF1LQ9BQI0 150 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 FUT8Q9BYC5 575 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 TXLNGYQ9BZA5 131 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 SLC6A16Q9GZN6 736 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 PELI2Q9HAT8 420 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 NECTIN3Q9NQS3 549 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 NSMCE4AQ9NXX6 385 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 SLC22A14Q9Y267 594 aa10.45□□□□□ -0.74
TARDBP-221ENST00000619555 AKAP9Q99996 3911 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 IGKV3D-11A0A0A0MRZ8 115 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 TCRBV16S1A1N1A0A5B0 115 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 HMX2A2RU54 273 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 NPEPPSL1A6NEC2 478 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 SAGE2PA6NJ88 616 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 C19orf84I3L1E1 186 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 ASNA1O43681 348 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 NME2P1O60361 137 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 SLC25A12O75746 678 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 MLYCDO95822 493 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 RNH1P13489 461 aaKnown RBP10.44□□□□□ -0.74
TARDBP-221ENST00000619555 COX6B1P14854 86 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 ZNF37AP17032 561 aaPredicted RBP10.44□□□□□ -0.74
TARDBP-221ENST00000619555 NME2P22392 152 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 CYB561P49447 251 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 SMSP52788 366 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 SKP1P63208 163 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 TOR1AIP1Q5JTV8 583 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 NIPAL1Q6NVV3 410 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 CHERPQ8IWX8 916 aaKnown RBP10.44□□□□□ -0.74
TARDBP-221ENST00000619555 CA13Q8N1Q1 262 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 CPSF7Q8N684 471 aaKnown RBP10.44□□□□□ -0.74
TARDBP-221ENST00000619555 FAM98AQ8NCA5 519 aaKnown RBP10.44□□□□□ -0.74
TARDBP-221ENST00000619555 TRPV3Q8NET8 790 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 UHMK1Q8TAS1 419 aaKnown RBP10.44□□□□□ -0.74
TARDBP-221ENST00000619555 CREB3L4Q8TEY5 395 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 MRRFQ96E11 262 aaKnown RBP10.44□□□□□ -0.74
TARDBP-221ENST00000619555 GPR22Q99680 433 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 EPB41L4BQ9H329 900 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 ACSS3Q9H6R3 686 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 CHST11Q9NPF2 352 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 MEMO1Q9Y316 297 aa10.44□□□□□ -0.74
TARDBP-221ENST00000619555 INTS1Q8N201 2190 aaKnown RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 A0A0G2JN53 185 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 URADA6NGE7 173 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 PSMD12O00232 456 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 PHGDHO43175 533 aaKnown RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 SERPINA6P08185 405 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 ABOP16442 354 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 POU3F2P20265 443 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 ELAVL4P26378 380 aaKnown RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 TRHRP34981 398 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 GDF5P43026 501 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 HLCSP50747 726 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 BTN3A2P78410 334 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 BMPR2Q13873 1038 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 RUNX2Q13950 521 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 GRTP1Q5TC63 336 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 C3P1Q6ZMU1 363 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 GDF7Q7Z4P5 450 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 FGD2Q7Z6J4 655 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 CMC1Q7Z7K0 106 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 DOLPP1Q86YN1 238 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 GHDCQ8N2G8 530 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 NKAPQ8N5F7 415 aaKnown RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 MTFMTQ96DP5 389 aaKnown RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 EGFL8Q99944 293 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 DEFB126Q9BYW3 111 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 TRIM45Q9H8W5 580 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 CLK4Q9HAZ1 481 aaKnown RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 KCNE2Q9Y6J6 123 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 V9GYY5 206 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-221ENST00000619555 ADGRG4Q8IZF6 3080 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 C2CD3Q4AC94 2353 aa10.43□□□□□ -0.74
TARDBP-221ENST00000619555 TRBV11-1A0A0K0K1C0 115 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 TGFBR3LH3BV60 316 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 CDK2AP1O14519 115 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 ADAM10O14672 748 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 RIPK2O43353 540 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 MYO1DO94832 1006 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 SLU7O95391 586 aaKnown RBP10.42□□□□□ -0.74
TARDBP-221ENST00000619555 CLDN14O95500 239 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 C1GALT1C1LP0DN25 315 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 ZNF24P17028 368 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 AGAP20933 346 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 GCAP28676 217 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 PPP2R1BP30154 601 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 PTGER1P34995 402 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 PTGER4P35408 488 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 RFC3P40938 356 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 KIR3DL1P43629 444 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 MEOX1P50221 254 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 VSNL1P62760 191 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 POU4F1Q01851 419 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 NAB1Q13506 487 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 TSNQ15631 228 aaKnown RBP10.42□□□□□ -0.74
TARDBP-221ENST00000619555 ZKSCAN8Q15776 578 aaPredicted RBP10.42□□□□□ -0.74
TARDBP-221ENST00000619555 SLCO4C1Q6ZQN7 724 aa10.42□□□□□ -0.74
TARDBP-221ENST00000619555 CEP128Q6ZU80 1094 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms