RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 B3GNT7Q8NFL0 401 aa17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 FBF1Q8TES7 1133 aa17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 QRFPRQ96P65 431 aa17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 PCNX1Q96RV3 2341 aa17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 DEFB126Q9BYW3 111 aa17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 NUDT4Q9NZJ9 180 aa17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 LRFN1Q9P244 771 aa17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 ZNF490Q9ULM2 529 aaPredicted RBP17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 PPIEQ9UNP9 301 aaKnown RBP17.85■□□□□ 0.45
CCDC28A-203ENST00000617445 CCNT2O60583 730 aaKnown RBP17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 SP1P08047 785 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 LTA4HP09960 611 aaKnown RBP17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 SLC35E2BP0CK96 405 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 TRHRP34981 398 aaPredicted RBP17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 CYB561P49447 251 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 CLCN2P51788 898 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 MTTPP55157 894 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 CASP6P55212 293 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 MLF1P58340 268 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 E2F2Q14209 437 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 SLMAPQ14BN4 828 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 EFTUD2Q15029 972 aaKnown RBP eCLIP17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 SPINK14Q6IE38 97 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 SLC25A25Q6KCM7 469 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 ABHD17CQ6PCB6 329 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 CEP128Q6ZU80 1094 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 FJX1Q86VR8 437 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 THAP3Q8WTV1 239 aaPredicted RBP17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 COPS7BQ9H9Q2 264 aaPredicted RBP17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 PRTFDC1Q9NRG1 225 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 SUCOQ9UBS9 1254 aaKnown RBP17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 ACOT9Q9Y305 439 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 GTF3C1Q12789 2109 aa17.84■□□□□ 0.45
CCDC28A-203ENST00000617445 SYCE1LA8MT33 242 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 MAN1A2O60476 641 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 PRAMEF4O60810 478 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 KERAO60938 352 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 NEURL1O76050 574 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 TFEBP19484 476 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 SERPINB1P30740 379 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 KCNC1P48547 511 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 HLCSP50747 726 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 PLA2G16P53816 162 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 CHIT1Q13231 466 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 TRADDQ15628 312 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 TMEM35AQ53FP2 167 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 PRAMEF9Q5VWM5 478 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 C1QL3Q5VWW1 255 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 VN1R5Q7Z5H4 357 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 KIF2BQ8N4N8 673 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 RHEBL1Q8TAI7 183 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 UBTD2Q8WUN7 234 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 ESAMQ96AP7 390 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 TMEM125Q96AQ2 219 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 KCNC2Q96PR1 638 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 ALG9Q9H6U8 611 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 KLHL1Q9NR64 748 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 ANKRD10Q9NXR5 420 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 ADGRE2Q9UHX3 823 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 DAPP1Q9UN19 280 aa17.83■□□□□ 0.44
CCDC28A-203ENST00000617445 A0A087X1B8 175 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 SLC25A12O75746 678 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 FAM155BO75949 473 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 TBX6O95947 436 aaPredicted RBP17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 TPP2P29144 1249 aaPredicted RBP17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 DCTP40126 519 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 CA7P43166 264 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 ALDH6A1Q02252 535 aaKnown RBP17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 SLC13A2Q13183 592 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 FAM83EQ2M2I3 478 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 FBXO48Q5FWF7 155 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 C8orf74Q6P047 294 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 CHSY3Q70JA7 882 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 CMC1Q7Z7K0 106 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 C17orf53Q8N3J3 647 aaPredicted RBP17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 TMEM132CQ8N3T6 1108 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 APCDD1LQ8NCL9 501 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 VMP1Q96GC9 406 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 ATOH8Q96SQ7 321 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 TBCDQ9BTW9 1192 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 TSPYL1Q9H0U9 437 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 LYRM4Q9HD34 91 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 ADAP2Q9NPF8 381 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 OPTCQ9UBM4 332 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 CROCCQ5TZA2 2017 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 CREBBPQ92793 2442 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 CRYBG3Q68DQ2 2970 aa17.82■□□□□ 0.44
CCDC28A-203ENST00000617445 TRGV8A0A0C4DH27 118 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 A0A0G2JN53 185 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 A8MUA0 341 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 SUPT3HB4E1H0 165 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 K7EPI3 171 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 CYR61O00622 381 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 ZG16O60844 167 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 CTNSO60931 367 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 SUPT3HO75486 399 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 MYO1DO94832 1006 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 EPORP19235 508 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 CD22P20273 847 aa17.81■□□□□ 0.44
CCDC28A-203ENST00000617445 PHBP35232 272 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms