RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 NPIPA3F8WFD2 350 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 GPAA1O43292 621 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 PLOD3O60568 738 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 USO1O60763 962 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 RECQL5O94762 991 aaPredicted RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 PSMA3P25788 255 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 HMGCS2P54868 508 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 NAP1L1P55209 391 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 PFN3P60673 137 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 POLR2LP62875 67 aaKnown RBP0.72□□□□□ -2.29
CEP290-208ENST00000604024 SULT2A1Q06520 285 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 SCRIBQ14160 1630 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 PTGISQ16647 500 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 NHSL1Q5SYE7 1610 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 PLPP4Q5VZY2 271 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 TMEM211Q6ICI0 200 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 FUT10Q6P4F1 479 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 CLEC17AQ6ZS10 378 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 DET1Q7L5Y6 550 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 KIR2DL5AQ8N109 375 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 SPATA18Q8TC71 538 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 SIPA1Q96FS4 1042 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 KIR2DL4Q99706 377 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 CCDC3Q9BQI4 270 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 CCM2Q9BSQ5 444 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 PI4K2AQ9BTU6 479 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 PEG3Q9GZU2 1588 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 UBQLN3Q9H347 655 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 SLC24A2Q9UI40 661 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 ABCG2Q9UNQ0 655 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 ZNF175Q9Y473 711 aa0.72□□□□□ -2.29
CEP290-208ENST00000604024 ADAMTSL3P82987 1691 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 A0A1W2PPK0 400 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 ZFP92A6NM28 416 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 C17orf105B2RV13 164 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 CTDSP2O14595 271 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 GJB5O95377 273 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 HMGB1P09429 215 aaKnown RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 CD1DP15813 335 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 EPORP19235 508 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PPP2R1BP30154 601 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PCGF2P35227 344 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 SLC25A1P53007 311 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 DHX8Q14562 1220 aaKnown RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 AACSQ86V21 672 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 SYT2Q8N9I0 419 aaPredicted RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 C8orf46Q8TAG6 207 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 TBCKQ8TEA7 893 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 TFB1MQ8WVM0 346 aaKnown RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 PCNPQ8WW12 178 aaKnown RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 P2RX5Q93086 422 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 TMCO6Q96DC7 493 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 RCHY1Q96PM5 261 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 MCCC1Q96RQ3 725 aaPredicted RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 NDNQ99608 321 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 CUEDC2Q9H467 287 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 IMPAD1Q9NX62 359 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 DPM3Q9P2X0 92 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 KIF21AQ7Z4S6 1674 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 FANCD2Q9BXW9 1451 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 COL1A2P08123 1366 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 NINLQ9Y2I6 1382 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 IGLV4-60A0A075B6I1 120 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 TRAV9-2A0A087WT02 112 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 IGHV3-35A0A0C4DH35 117 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PDXKO00764 312 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 ZNF749O43361 778 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 ZWINTO95229 277 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 CD27P26842 260 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PPP2R1AP30153 589 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 MPP1Q00013 466 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 LRRC63Q05C16 580 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 RASGEF1BQ0VAM2 473 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 RALGDSQ12967 914 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PSG7Q13046 419 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 KRT31Q15323 416 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 KNOP1Q1ED39 458 aaKnown RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 SLC22A6Q4U2R8 563 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 ALFQ53S48 1182 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 DCST2Q5T1A1 773 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PLPPR4Q7Z2D5 763 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 ABI3BPQ7Z7G0 1075 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 KBTBD6Q86V97 674 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 TTC39CQ8N584 583 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 ZNF561Q8N587 486 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 HDAC2Q92769 488 aaKnown RBP0.71□□□□□ -2.3
CEP290-208ENST00000604024 MUS81Q96NY9 551 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 RANBP9Q96S59 729 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PAFAH2Q99487 392 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 CPNE1Q99829 537 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 PLA2G12AQ9BZM1 189 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 ABCC13Q9NSE7 274 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 RSPH14Q9UHP6 348 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 FBN3Q75N90 2809 aa0.71□□□□□ -2.3
CEP290-208ENST00000604024 CUX1P39880 1505 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 MAGI3Q5TCQ9 1506 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 RNF212BA8MTL3 300 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 PTGES3LE9PB15 166 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 TRIM77I1YAP6 450 aa0.7□□□□□ -2.3
CEP290-208ENST00000604024 NPHP1O15259 732 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms