RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 MYO1DO94832 1006 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 TPOP07202 933 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 CHRNB4P30926 498 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 BTN3A2P78410 334 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 TLE4Q04727 773 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 TGM3Q08188 693 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 MSS51Q4VC12 460 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 TOR1AIP1Q5JTV8 583 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 STEAP4Q687X5 459 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 MEX3BQ6ZN04 569 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 RND1Q92730 232 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 DAZLQ92904 295 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 ROGDIQ9GZN7 287 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 SPNS1Q9H2V7 528 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 EHD1Q9H4M9 534 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 KLHL31Q9H511 634 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 CNOT10Q9H9A5 744 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 ADAP2Q9NPF8 381 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 PRTFDC1Q9NRG1 225 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 SNX12Q9UMY4 172 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 ERVK-11Q9UQG0 969 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 TEX264Q9Y6I9 313 aa16.61■□□□□ 0.25
SHKBP1-227ENST00000602011 ANKDD1BA6NHY2 528 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 A8MUA0 341 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 A8MVJ9 347 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 ACOT7O00154 380 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 B3GALT4O96024 378 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 TCP1P17987 556 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 PTGER1P34995 402 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 ELK3P41970 407 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 GPR143P51810 404 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 RAB38P57729 211 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 MGAT5Q09328 741 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 SLC13A2Q13183 592 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 TESK1Q15569 626 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 ELAVL1Q15717 326 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 C3P1Q6ZMU1 363 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 SLCO4C1Q6ZQN7 724 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 FRA10AC1Q70Z53 315 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 FGD2Q7Z6J4 655 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 IGDCC3Q8IVU1 814 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 MORN4Q8NDC4 146 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 SRFBP1Q8NEF9 429 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 OR8K3Q8NH51 312 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 KIAA1191Q96A73 305 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 PDLIM2Q96JY6 352 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 KCNJ16Q9NPI9 418 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 PNO1Q9NRX1 252 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 HPF1Q9NWY4 346 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 CTNNAL1Q9UBT7 734 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 CLCA3PQ9Y6N3 262 aa16.6■□□□□ 0.25
SHKBP1-227ENST00000602011 OR14I1A6ND48 311 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 HS6ST1O60243 411 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 CTNSO60931 367 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 SAT1P21673 171 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 IVDP26440 423 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 ARL4CP56559 192 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 HSF1Q00613 529 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 CBLBQ13191 982 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 BIKQ13323 160 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 SERTAD2Q14140 314 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 ADPRMQ3LIE5 342 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 CMPK2Q5EBM0 449 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 NDUFAF5Q5TEU4 345 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 TRIM40Q6P9F5 258 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 ZC3HC1Q86WB0 502 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 OR2L5Q8NG80 312 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 OR5L2Q8NGL0 311 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 MS4A6EQ96DS6 147 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 SGCZQ96LD1 299 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 SERINC2Q96SA4 455 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 MYOTQ9UBF9 498 aa16.59■□□□□ 0.25
SHKBP1-227ENST00000602011 CDC7O00311 574 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 ERI3O43414 337 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 CDC40O60508 579 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 DIAPH2O60879 1101 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 WDR47O94967 919 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 IGFBP2P18065 325 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 GGT5P36269 586 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 SLC6A12P48065 614 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 SLC12A2P55011 1212 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 MTTPP55157 894 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 LAPTM5Q13571 262 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 BMPR2Q13873 1038 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 RUNX2Q13950 521 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 HSDL2Q6YN16 418 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 CDH24Q86UP0 819 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 CD163Q86VB7 1156 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 SLC22A16Q86VW1 577 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 PSD4Q8NDX1 1056 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 OR14A16Q8NHC5 309 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 ASB15Q8WXK1 588 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 NCLNQ969V3 563 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 RHBDF1Q96CC6 855 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 CFAP36Q96G28 342 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 REXO4Q9GZR2 422 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 DDX47Q9H0S4 455 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 MOCS1Q9NZB8 636 aa16.58■□□□□ 0.24
SHKBP1-227ENST00000602011 VTI1BQ9UEU0 232 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms