RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CD96P40200 585 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 MSH2P43246 934 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 RAB38P57729 211 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 KCNK10P57789 538 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 TGM3Q08188 693 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 OR1C1Q15619 314 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 FAM83EQ2M2I3 478 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 C4orf17Q53FE4 359 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 SPINK14Q6IE38 97 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 CLNKQ7Z7G1 428 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 RPS19BP1Q86WX3 136 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 MYLK4Q86YV6 388 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 IFT20Q8IY31 132 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 ELP5Q8TE02 316 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 NR4A3Q92570 626 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 ATOH8Q96SQ7 321 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 NPAS2Q99743 824 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 NPLQ9BXD5 320 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 PRTFDC1Q9NRG1 225 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 PNO1Q9NRX1 252 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 COPG2Q9UBF2 871 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 MRPS33Q9Y291 106 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 MMACHCQ9Y4U1 282 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 ANGPTL3Q9Y5C1 460 aa11.9□□□□□ -0.5
NPLOC4-213ENST00000573519 NBASA2RRP1 2371 aa11.9□□□□□ -0.51
NPLOC4-213ENST00000573519 CPAMD8Q8IZJ3 1885 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 A0A096LPK6 155 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 IGKV3D-11A0A0A0MRZ8 115 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 POC1B-GALNT4F8VUJ3 575 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 K7EPI3 171 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 CLDN4O14493 209 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 MYO1DO94832 1006 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 UNC5CO95185 931 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 TBX6O95947 436 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 LDLRP01130 860 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 ALDOAP04075 364 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 INHBAP08476 426 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 FAM153BP0C7A2 387 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 GFAPP14136 432 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 CD46P15529 392 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 EPB42P16452 691 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 EPORP19235 508 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 TYK2P29597 1187 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 SERPINB8P50452 374 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 MTTPP55157 894 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 DDX39BQ13838 428 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 FAM153CQ494X1 144 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 KLC3Q6P597 504 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 ABHD17CQ6PCB6 329 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 GFRALQ6UXV0 394 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 GSPT2Q8IYD1 628 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 CENPLQ8N0S6 344 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 TEX9Q8N6V9 391 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 TMEM52Q8NDY8 209 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 ADAMTS18Q8TE60 1221 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 SLC44A1Q8WWI5 657 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 UBE2E3Q969T4 207 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 WDR34Q96EX3 536 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 QRFPRQ96P65 431 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 SERINC2Q96SA4 455 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 PAFAH2Q99487 392 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 FUT8Q9BYC5 575 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 HES7Q9BYE0 225 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 DEFB126Q9BYW3 111 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 VPS11Q9H270 941 aa11.89□□□□□ -0.51
NPLOC4-213ENST00000573519 UTP20O75691 2785 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 PRRC2CQ9Y520 2896 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 TRBV11-1A0A0K0K1C0 115 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 MYOCOSA0A1B0GUC4 107 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 SAP18O00422 153 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 KLHL2O95198 593 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 TGFB1P01137 390 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 IFNA16P05015 189 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 MST1P26927 711 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 TPP2P29144 1249 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 PPP2R1BP30154 601 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 TDGF1P3P51864 188 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 HNRNPFP52597 415 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 LIM2P55344 173 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 PER3P56645 1201 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 HSD17B7P56937 341 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 RCN2Q14257 317 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 TBCCQ15814 346 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 PFKFB4Q16877 469 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 ADPRMQ3LIE5 342 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 C1QL3Q5VWW1 255 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF324BQ6AW86 544 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 MED27Q6P2C8 311 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 CCDC91Q7Z6B0 441 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 FJX1Q86VR8 437 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 HORMAD2Q8N7B1 307 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 MDS2Q8NDY4 140 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 DNAJB8Q8NHS0 232 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 RHEBL1Q8TAI7 183 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 THAP3Q8WTV1 239 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 UBTD2Q8WUN7 234 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 KCNC2Q96PR1 638 aa11.88□□□□□ -0.51
NPLOC4-213ENST00000573519 CSF3RQ99062 836 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms