RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CLCN2P51788 898 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 BTN3A2P78410 334 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 MRPL49Q13405 166 aaKnown RBP15.7■□□□□ 0.1
USB1-211ENST00000565662 SETDB1Q15047 1291 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 UAP1Q16222 522 aaPredicted RBP15.7■□□□□ 0.1
USB1-211ENST00000565662 MROH9Q5TGP6 573 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 GRHL2Q6ISB3 625 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 ABHD17CQ6PCB6 329 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 CMC1Q7Z7K0 106 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 SPNS2Q8IVW8 549 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 ARMC10Q8N2F6 343 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 TMEM132CQ8N3T6 1108 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 SLC44A1Q8WWI5 657 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 DAZLQ92904 295 aaKnown RBP15.7■□□□□ 0.1
USB1-211ENST00000565662 EXT2Q93063 718 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 ISL2Q96A47 359 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 C19orf60Q96EN9 201 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 ADAP2Q9NPF8 381 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 PRTFDC1Q9NRG1 225 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 DAPP1Q9UN19 280 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 CSAG2Q9Y5P2 127 aa15.7■□□□□ 0.1
USB1-211ENST00000565662 SETXQ7Z333 2677 aaKnown RBP15.7■□□□□ 0.1
USB1-211ENST00000565662 RELNP78509 3460 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 A0A087WUV0 522 aaPredicted RBP15.69■□□□□ 0.1
USB1-211ENST00000565662 A8MUI8 341 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 SCELO95171 688 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 HNRNPH1P31943 449 aaKnown RBP15.69■□□□□ 0.1
USB1-211ENST00000565662 EFNA3P52797 238 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 SLC13A2Q13183 592 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 PCBP2Q15366 365 aaKnown RBP eCLIP15.69■□□□□ 0.1
USB1-211ENST00000565662 ELAVL1Q15717 326 aaKnown RBP15.69■□□□□ 0.1
USB1-211ENST00000565662 C4orf17Q53FE4 359 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 ZNF766Q5HY98 468 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 RPS19BP1Q86WX3 136 aaKnown RBP15.69■□□□□ 0.1
USB1-211ENST00000565662 SCUBE1Q8IWY4 988 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 GPALPP1Q8IXQ4 340 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 CENPLQ8N0S6 344 aaPredicted RBP15.69■□□□□ 0.1
USB1-211ENST00000565662 SPATA6LQ8N4H0 392 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 B3GNT7Q8NFL0 401 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 TSLPQ969D9 159 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 TMEM125Q96AQ2 219 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 VMP1Q96GC9 406 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 CDC42EP4Q9H3Q1 356 aaKnown RBP15.69■□□□□ 0.1
USB1-211ENST00000565662 IGSF5Q9NSI5 407 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 PSD3Q9NYI0 1048 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 NINJ2Q9NZG7 142 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 PPT2Q9UMR5 302 aa15.69■□□□□ 0.1
USB1-211ENST00000565662 PPIEQ9UNP9 301 aaKnown RBP15.69■□□□□ 0.1
USB1-211ENST00000565662 IGHV3-20A0A0C4DH32 117 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 GABRR3A8MPY1 467 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 E2F3O00716 465 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 KLK8O60259 260 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 ABHD2P08910 425 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 COX7A2P14406 83 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 EEF1DP29692 281 aaKnown RBP15.68■□□□□ 0.1
USB1-211ENST00000565662 TLX1P31314 330 aaPredicted RBP15.68■□□□□ 0.1
USB1-211ENST00000565662 MSH2P43246 934 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 PLA2G16P53816 162 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 CASP6P55212 293 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 OLR1P78380 273 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 EIF2S3LQ2VIR3 472 aaKnown RBP15.68■□□□□ 0.1
USB1-211ENST00000565662 AP5B1Q2VPB7 878 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 CRLF3Q8IUI8 442 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 IFT20Q8IY31 132 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 CYP4X1Q8N118 509 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 EID3Q8N140 333 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 BEST3Q8N1M1 668 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 POGLUT1Q8NBL1 392 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 NXNL1Q96CM4 212 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 MTBPQ96DY7 904 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 QRFPRQ96P65 431 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 MESP1Q9BRJ9 268 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 PELOQ9BRX2 385 aaKnown RBP15.68■□□□□ 0.1
USB1-211ENST00000565662 MS4A8Q9BY19 250 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 DEFB126Q9BYW3 111 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 UNKQ9C0B0 810 aaKnown RBP15.68■□□□□ 0.1
USB1-211ENST00000565662 KLHL31Q9H511 634 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 PHF11Q9UIL8 331 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 NTNG1Q9Y2I2 539 aa15.68■□□□□ 0.1
USB1-211ENST00000565662 PRRC2CQ9Y520 2896 aaKnown RBP15.68■□□□□ 0.1
USB1-211ENST00000565662 H0YIV9 168 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 STX16-NPEPL1H3BU86 382 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 UBXN8O00124 270 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 STX16O14662 325 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 CTNSO60931 367 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 SMIM24O75264 130 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 FAM155BO75949 473 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 CELA2AP08217 269 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 STSP08842 583 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 TRHRP34981 398 aaPredicted RBP15.67■□□□□ 0.1
USB1-211ENST00000565662 SSR2P43308 183 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 CYB561P49447 251 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 RAP1GDS1P52306 607 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 LIM2P55344 173 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 SNRPNP63162 240 aaKnown RBP15.67■□□□□ 0.1
USB1-211ENST00000565662 OC90Q02509 493 aaPredicted RBP15.67■□□□□ 0.1
USB1-211ENST00000565662 SRSF1Q07955 248 aaKnown RBP eCLIP15.67■□□□□ 0.1
USB1-211ENST00000565662 TUBA3CQ13748 450 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 KRTCAP3Q53RY4 240 aa15.67■□□□□ 0.1
USB1-211ENST00000565662 ZNF324BQ6AW86 544 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms