RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 GRIA1P42261 906 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 CXorf57Q6NSI4 855 aaKnown RBP11.53□□□□□ -0.56
NEK9-210ENST00000557026 CLEC1AQ8NC01 280 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 PAPD5Q8NDF8 572 aaKnown RBP11.53□□□□□ -0.56
NEK9-210ENST00000557026 SETD6Q8TBK2 473 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 TANKQ92844 425 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 SCRN2Q96FV2 425 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 KCTD7Q96MP8 289 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 IP6K3Q96PC2 410 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 LENG8Q96PV6 779 aaPredicted RBP11.53□□□□□ -0.56
NEK9-210ENST00000557026 SEC61A2Q9H9S3 476 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 TPT1P8Q9HAU6 139 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 CD248Q9HCU0 757 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 AASSQ9UDR5 926 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 CYTH4Q9UIA0 394 aa11.53□□□□□ -0.56
NEK9-210ENST00000557026 C14orf166Q9Y224 244 aaKnown RBP11.53□□□□□ -0.56
NEK9-210ENST00000557026 DNAJB5O75953 348 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 PENKP01210 267 aaPredicted RBP11.52□□□□□ -0.56
NEK9-210ENST00000557026 MYCLP1P12525 358 aaPredicted RBP11.52□□□□□ -0.56
NEK9-210ENST00000557026 C6P13671 934 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 CDKN1CP49918 316 aaPredicted RBP11.52□□□□□ -0.56
NEK9-210ENST00000557026 TGFBIQ15582 683 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 TYSND1Q2T9J0 566 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 COQ5Q5HYK3 327 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 ZFAND4Q86XD8 727 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 KDM1BQ8NB78 822 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 OR56A3Q8NH54 315 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 GPR62Q9BZJ7 368 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 ZNF222Q9UK12 451 aa11.52□□□□□ -0.56
NEK9-210ENST00000557026 A0A096LPI6 279 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 WASH4PA8MWX3 477 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 AIREO43918 545 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CDK4P11802 303 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CLCN2P51788 898 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 ADARP55265 1226 aaKnown RBP11.52□□□□□ -0.57
NEK9-210ENST00000557026 RIN1Q13671 783 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 MOGQ16653 247 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
NEK9-210ENST00000557026 PPM1JQ5JR12 505 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 C3orf33Q6P1S2 294 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 BORAQ6PGQ7 559 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 NXPE4Q6UWF7 544 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 LRRN1Q6UXK5 716 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 DPPA4Q7L190 304 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 KIAA0907Q7Z7F0 614 aaPredicted RBP11.52□□□□□ -0.57
NEK9-210ENST00000557026 ARL14Q8N4G2 192 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 ZNF781Q8N8C0 355 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 YIPF7Q8N8F6 280 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 OR4F6Q8NGB9 312 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 PMM1Q92871 262 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 BORCS8Q96FH0 119 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 COPS4Q9BT78 406 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 URM1Q9BTM9 101 aaKnown RBP11.52□□□□□ -0.57
NEK9-210ENST00000557026 NMUR2Q9GZQ4 415 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 EMC3Q9P0I2 261 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 PRKAB1Q9Y478 270 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 A6NIZ1 184 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 A8MVJ9 347 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 LOC730098B7Z3J9 87 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 BTN3A3O00478 584 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 PAK4O96013 591 aaPredicted RBP11.52□□□□□ -0.57
NEK9-210ENST00000557026 RAP1BP61224 184 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 HERV-K104P61576 105 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 RAP1AP62834 184 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 ZNF280BQ86YH2 543 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 HPF1Q9NWY4 346 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 PFDN2Q9UHV9 154 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 A0A0J9YY10 115 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 FAM172BPA6NC97 362 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CSTAP01040 98 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CA3P07451 260 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 C7P10643 843 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CD6P30203 668 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CHRNA4P43681 627 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 ACADVLP49748 655 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CRISP1P54107 249 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 RPS13P62277 151 aaKnown RBP11.52□□□□□ -0.57
NEK9-210ENST00000557026 TUBA1BP68363 451 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 TUBA4AP68366 448 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 UGT3A2Q3SY77 523 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 TUBA1AQ71U36 451 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 MRPL43Q8N983 215 aaKnown RBP11.52□□□□□ -0.57
NEK9-210ENST00000557026 LRRC58Q96CX6 371 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 ZFYVE21Q9BQ24 234 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 ACTR3BQ9P1U1 418 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 HCN2Q9UL51 889 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 TMEM98Q9Y2Y6 226 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 CDH10Q9Y6N8 788 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 MYOM1P52179 1685 aa11.52□□□□□ -0.57
NEK9-210ENST00000557026 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 DISC1C4P0D8 188 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 LDB2O43679 373 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 HLA-EP13747 358 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 SIM2Q14190 667 aaPredicted RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 C5orf46Q6UWT4 87 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 MAMDC2Q7Z304 686 aaPredicted RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 TCEAL3Q969E4 200 aa11.51□□□□□ -0.57
NEK9-210ENST00000557026 NARS2Q96I59 477 aaKnown RBP11.51□□□□□ -0.57
NEK9-210ENST00000557026 TUBA1CQ9BQE3 449 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms