RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 SMIM18P0DKX4 95 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 CSH1P0DML2 217 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 CSH2P0DML3 217 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 CYBAP13498 195 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 AKR1B1P15121 316 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 PORP16435 677 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-219ENST00000556413 LMAN1P49257 510 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 ARSEP51690 589 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 NDPQ00604 133 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 BEX3Q00994 111 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 MS4A18Q3C1V0 323 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 LRIT3Q3SXY7 679 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 SYT14P1Q58G82 188 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 MFSD14CQ5VZR4 134 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 BAIAP2L2Q6UXY1 529 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 CHMP1BQ7LBR1 199 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 TMCO2Q7Z6W1 182 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-219ENST00000556413 ZER1Q7Z7L7 766 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 ZNF595Q8IYB9 648 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 PARP8Q8N3A8 854 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 C9orf43Q8TAL5 461 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-219ENST00000556413 SSMEM1Q8WWF3 244 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 SLC22A18Q96BI1 424 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 CALML4Q96GE6 196 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 FAM20AQ96MK3 541 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 WNT5BQ9H1J7 359 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 ADNPQ9H2P0 1102 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 Q9N2K0 584 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 PCDHGB4Q9UN71 923 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 AK9Q5TCS8 1911 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 LOC285556D6RIA3 1793 aa2.71□□□□□ -1.98
SCFD1-219ENST00000556413 KIF16BQ96L93 1317 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 MYH13Q9UKX3 1938 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 XIRP2A4UGR9 3374 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 MAST2Q6P0Q8 1798 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 IGLV4-3A0A075B6K6 122 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 NPIPB9F8W1W9 429 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 ZNF354AO60765 605 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-219ENST00000556413 PRDM1O75626 825 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 SURF6O75683 361 aaKnown RBP2.7□□□□□ -1.98
SCFD1-219ENST00000556413 FLOT1O75955 427 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 PGM3O95394 542 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 PRKAR1AP10644 381 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 DNASE1P24855 282 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 DRD3P35462 400 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 HLCSP50747 726 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 CDH13P55290 713 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 CCL23P55773 120 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 LYZP61626 148 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 HNRNPKP61978 463 aaKnown RBP eCLIP2.7□□□□□ -1.98
SCFD1-219ENST00000556413 GSTO1P78417 241 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 MAT1AQ00266 395 aaKnown RBP2.7□□□□□ -1.98
SCFD1-219ENST00000556413 GRB14Q14449 540 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 UGT3A2Q3SY77 523 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 ITPRIPL1Q6GPH6 555 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 DHRS7BQ6IAN0 325 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-219ENST00000556413 TMEM211Q6ICI0 200 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 ITPRIPQ8IWB1 547 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 GUF1Q8N442 669 aaKnown RBP2.7□□□□□ -1.98
SCFD1-219ENST00000556413 SLC37A3Q8NCC5 494 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 OR5T2Q8NGG2 359 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 CCDC34Q96HJ3 373 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 C4orf45Q96LM5 186 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 C2orf48Q96LS8 159 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 TIGD1Q96MW7 591 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 ATF6BQ99941 703 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 OSGEPL1Q9H4B0 414 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 SLC35C2Q9NQQ7 365 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 GPR34Q9UPC5 381 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 MGAMO43451 1857 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 MUC3AQ02505 3323 aa2.7□□□□□ -1.98
SCFD1-219ENST00000556413 ZNF532Q9HCE3 1301 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 SYNRGQ9UMZ2 1314 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 SLC15A5A6NIM6 579 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 A8MV72 311 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 SH3BP5O60239 455 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 GFPT2O94808 682 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 BAG3O95817 575 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 LDHCP07864 332 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 ASNSP08243 561 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 EPS8Q12929 822 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 CHAF1BQ13112 559 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 ZNF177Q13360 481 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 TMEM132DQ14C87 1099 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 WTAPQ15007 396 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 SPECC1Q5M775 1068 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 HYIQ5T013 277 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 FAM182AQ5T1J6 154 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 RNASEH2BQ5TBB1 312 aaKnown RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 DEFB128Q7Z7B8 93 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 TMPRSS11BQ86T26 416 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 FBXO16Q8IX29 292 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 RPAP2Q8IXW5 612 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 RHOXF1Q8NHV9 184 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 LPGAT1Q92604 370 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 ZIM3Q96PE6 472 aa2.69□□□□□ -1.98
SCFD1-219ENST00000556413 RIOK1Q9BRS2 568 aaKnown RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 API5Q9BZZ5 524 aaKnown RBP2.69□□□□□ -1.98
SCFD1-219ENST00000556413 MAF1Q9H063 256 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms