RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ESRRBO95718 433 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 GBAP04062 536 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 UQCRHP07919 91 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 MMP11P24347 488 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 ATP5A1P25705 553 aaKnown RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 PTX3P26022 381 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 ARRB2P32121 409 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 BSGP35613 385 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 SSR2P43308 183 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 LIM2P55344 173 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 RAB38P57729 211 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 BTG2P78543 158 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 TGM3Q08188 693 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 AP5B1Q2VPB7 878 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 TMEM35AQ53FP2 167 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 TTMPQ5BVD1 217 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 CLEC6AQ6EIG7 209 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 OR4C11Q6IEV9 310 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 BORAQ6PGQ7 559 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 KIRREL2Q6UWL6 708 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 ACOT4Q8N9L9 421 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 TMEM52Q8NDY8 209 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 RGMAQ96B86 450 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 TBC1D20Q96BZ9 403 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 MAGEB10Q96LZ2 347 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 CATSPER2Q96P56 530 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 KCNC2Q96PR1 638 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 SERINC2Q96SA4 455 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 SERPINI1Q99574 410 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 MAPKAP1Q9BPZ7 522 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 ZNF717Q9BY31 904 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 MRPL1Q9BYD6 325 aaKnown RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 SLC29A3Q9BZD2 475 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 STMN4Q9H169 189 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 SEMA3GQ9NS98 782 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 P4HTMQ9NXG6 502 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 FBXW2Q9UKT8 454 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 SLC12A4Q9UP95 1085 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 STK38LQ9Y2H1 464 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 CPAMD8Q8IZJ3 1885 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 A0A088AWK7 358 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 MYOCOSA0A1B0GUC4 107 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 PSMD12O00232 456 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 TM9SF1O15321 606 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 CRCPO75575 148 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 LYPLA1O75608 230 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 ENO1P06733 434 aaKnown RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 FHP07954 510 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 FAM87AP0C7U9 286 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 DHRS4L1P0CG22 281 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 RNH1P13489 461 aaKnown RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 ZNF10P21506 573 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 HIST1H1TP22492 207 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 HPDP32754 393 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 HNRNPH2P55795 449 aaKnown RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 SKP1P63208 163 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 RHAGQ02094 409 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 RHDQ02161 417 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 SLAMF1Q13291 335 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 CUL3Q13618 768 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 ABRAXAS2Q15018 415 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 ARL13AQ5H913 290 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 AGBL2Q5U5Z8 902 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 NIPAL1Q6NVV3 410 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 CUZD1Q86UP6 607 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 NUDCD3Q8IVD9 361 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 AGR3Q8TD06 166 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 THAP4Q8WY91 577 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 CNDP1Q96KN2 507 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 NPLQ9BXD5 320 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 ZNF395Q9H8N7 513 aaPredicted RBP12.08□□□□□ -0.48
VEGFA-224ENST00000523873 FBXL4Q9UKA2 621 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 PTGDR2Q9Y5Y4 395 aa12.08□□□□□ -0.48
VEGFA-224ENST00000523873 CACNA1GO43497 2377 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 A0A0A6YYD5 115 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 TMEM233B4DJY2 109 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 PEX12O00623 359 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 ITM2AO43736 263 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 TMPRSS11DO60235 418 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 NPHS1O60500 1241 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 PRKRAO75569 313 aaKnown RBP12.07□□□□□ -0.48
VEGFA-224ENST00000523873 SCELO95171 688 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 ZWINTO95229 277 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 IGHEP01854 428 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 KRT6AP02538 564 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 KRT6BP04259 564 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 C8orf89P0DMQ9 161 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 MAOAP21397 527 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 BGNP21810 368 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 KRT6CP48668 564 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 CCL11P51671 97 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 POLE2P56282 527 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 WDR4P57081 412 aaKnown RBP12.07□□□□□ -0.48
VEGFA-224ENST00000523873 NAA20P61599 178 aa12.07□□□□□ -0.48
VEGFA-224ENST00000523873 HMGCS1Q01581 520 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms