RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431		A0A0G2JMM0	328 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431		A0A1W2PPB8	328 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431		A0A1W2PRS3	328 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	TRBC2	A0A5B9	178 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	CTAGE9	A4FU28	777 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	PABPN1L	A6NDY0	278 aa	Known RBP	11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	KIR3DP1	A8MWS1	328 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	INAFM1	C9JVW0	142 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	WWP2	O00308	870 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	CLDN4	O14493	209 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	SMPD2	O60906	423 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	IPO7	O95373	1038 aa	Known RBP	11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	CELA3A	P09093	270 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	PAM	P19021	973 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	HNF4A	P41235	474 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	RAB8A	P61006	207 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	NAE1	Q13564	534 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	BBS9	Q3SYG4	887 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	XKR6	Q5GH73	641 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	AGTRAP	Q6RW13	159 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	OPN5	Q6U736	354 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	CES3	Q6UWW8	571 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	HSDL2	Q6YN16	418 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	CYHR1	Q6ZMK1	362 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	PEX26	Q7Z412	305 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	ULK2	Q8IYT8	1036 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	TMEM132C	Q8N3T6	1108 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	LIX1	Q8N485	282 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	GPATCH11	Q8N954	259 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	GOLM1	Q8NBJ4	401 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	LINC01560	Q8TB33	94 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	NT5C	Q8TCD5	201 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	UTP15	Q8TED0	518 aa	Known RBP	11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	ATG4A	Q8WYN0	398 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	KCNJ9	Q92806	393 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	RASL10B	Q96S79	203 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	SLC30A3	Q99726	388 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	AARSD1	Q9BTE6	412 aa	Known RBP	11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	KIFC1	Q9BW19	673 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	ZFP69B	Q9UJL9	534 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	ZNF223	Q9UK11	482 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	SH2B3	Q9UQQ2	575 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	DHRS7	Q9Y394	339 aa		11.63	□□□□□ -0.55
DDX41-215	ENST00000512431	NSD1	Q96L73	2696 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	SYNDIG1L	A6NDD5	238 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	MIF4GD	A9UHW6	222 aa	Known RBP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	AHRR	A9YTQ3	701 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	LIAS	O43766	372 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	PRKN	O60260	465 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	NPPB	P16860	134 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	HIST1H2AD	P20671	130 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	ARNT	P27540	789 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	DNASE1L1	P49184	302 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	SORD	Q00796	357 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	SLC13A2	Q13183	592 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	LRRC8E	Q6NSJ5	796 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	NEPRO	Q6NW34	567 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	STRA8	Q7Z7C7	330 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	CILP2	Q8IUL8	1156 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	LRRC75A-AS1	Q8N1F1	130 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	CIART	Q8N365	385 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	VWA5B2	Q8N398	1253 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	TRPV3	Q8NET8	790 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	ABHD11	Q8NFV4	315 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	OR4K1	Q8NGD4	311 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	SNF8	Q96H20	258 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	SCYL1	Q96KG9	808 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	HIST1H2AH	Q96KK5	128 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	CAPZA3	Q96KX2	299 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431		Q96MF0	132 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	HIST1H2AJ	Q99878	128 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	H2AFJ	Q9BTM1	129 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	TSGA10	Q9BZW7	698 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	ADAP2	Q9NPF8	381 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	EIF2B3	Q9NR50	452 aa	Known RBP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	PRTFDC1	Q9NRG1	225 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	TUBA8	Q9NY65	449 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	CLCA3P	Q9Y6N3	262 aa		11.62	□□□□□ -0.55
DDX41-215	ENST00000512431	TCRBV7S2A1N4T	A0A589	114 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	EIF3F	O00303	357 aa	Predicted RBP	11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	CASK	O14936	926 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	EPPIN	O95925	133 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	IFNA16	P05015	189 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	C8B	P07358	591 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	C8G	P07360	202 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	ETS1	P14921	441 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	BMP7	P18075	431 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	MGAT1	P26572	445 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	CEACAM8	P31997	349 aa	Predicted RBP	11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	TIMP3	P35625	211 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	AHR	P35869	848 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	GPR143	P51810	404 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	HSD17B7	P56937	341 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	BASP1	P80723	227 aa	Known RBP	11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	FOXO1	Q12778	655 aa		11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	THOC5	Q13769	683 aa	Known RBP	11.61	□□□□□ -0.55
DDX41-215	ENST00000512431	CSHL1	Q14406	222 aa		11.61	□□□□□ -0.55

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