RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 RAB38P57729 211 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 TLR1Q15399 786 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 TMEM35AQ53FP2 167 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 MYLK4Q86YV6 388 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-202ENST00000419181 SCUBE1Q8IWY4 988 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 TMEM151AQ8N4L1 468 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 GALNT11Q8NCW6 608 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 SRFBP1Q8NEF9 429 aaKnown RBP19.07■□□□□ 0.64
GTF3A-202ENST00000419181 M1APQ8TC57 530 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 ADAMTS18Q8TE60 1221 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 SNRNP40Q96DI7 357 aaKnown RBP19.07■□□□□ 0.64
GTF3A-202ENST00000419181 PHF21BQ96EK2 531 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 CNDP1Q96KN2 507 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 IPPKQ9H8X2 491 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 COPS7BQ9H9Q2 264 aaPredicted RBP19.07■□□□□ 0.64
GTF3A-202ENST00000419181 MMP25Q9NPA2 562 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 NECTIN3Q9NQS3 549 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 ADGRE2Q9UHX3 823 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 MMACHCQ9Y4U1 282 aa19.07■□□□□ 0.64
GTF3A-202ENST00000419181 LRRK2Q5S007 2527 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 H0YIV9 168 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 SMIM24O75264 130 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 SBK3P0C264 359 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 PIK3CBP42338 1070 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 SLC26A5P58743 744 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 ACTN3Q08043 901 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-202ENST00000419181 ZNF169Q14929 603 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-202ENST00000419181 H3F3CQ6NXT2 135 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 ZNF793Q6ZN11 406 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 L3MBTL4Q8NA19 623 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 HUS1BQ8NHY5 278 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 CMTM7Q96FZ5 175 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 TBCDQ9BTW9 1192 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 ROGDIQ9GZN7 287 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 RNF32Q9H0A6 362 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 PSMC3IPQ9P2W1 217 aaPredicted RBP19.06■□□□□ 0.64
GTF3A-202ENST00000419181 PCTPQ9UKL6 214 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 DAPP1Q9UN19 280 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 PCDHGA11Q9Y5H2 935 aa19.06■□□□□ 0.64
GTF3A-202ENST00000419181 IQANK1A0A1B0GTG1 560 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 DYTNA2CJ06 578 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 CYR61O00622 381 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 OR7A17O14581 309 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 VPS4BO75351 444 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 SCELO95171 688 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 TGFB1P01137 390 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 UQCRHP07919 91 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 TSFMP43897 325 aaKnown RBP19.05■□□□□ 0.64
GTF3A-202ENST00000419181 HNRNPFP52597 415 aaKnown RBP19.05■□□□□ 0.64
GTF3A-202ENST00000419181 LIM2P55344 173 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 HSD17B7P56937 341 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 ARG2P78540 354 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 KHDRBS2Q5VWX1 349 aaKnown RBP19.05■□□□□ 0.64
GTF3A-202ENST00000419181 CHSY3Q70JA7 882 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 LCA5Q86VQ0 697 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 CNPY4Q8N129 248 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 RNF175Q8N4F7 328 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 CISD2Q8N5K1 135 aaKnown RBP19.05■□□□□ 0.64
GTF3A-202ENST00000419181 FAM47BQ8NA70 645 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 TMEM52Q8NDY8 209 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 CATSPER1Q8NEC5 780 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 ARMC2Q8NEN0 867 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 HAS2Q92819 552 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 C19orf60Q96EN9 201 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 NOL11Q9H8H0 719 aaKnown RBP19.05■□□□□ 0.64
GTF3A-202ENST00000419181 DMRT3Q9NQL9 472 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 PLA2G3Q9NZ20 509 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 TEKT2Q9UIF3 430 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 VPS4AQ9UN37 437 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 CLDN16Q9Y5I7 305 aa19.05■□□□□ 0.64
GTF3A-202ENST00000419181 SETXQ7Z333 2677 aaKnown RBP19.05■□□□□ 0.64
GTF3A-202ENST00000419181 RTCAO00442 366 aaKnown RBP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 SH3BGRLO75368 114 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 ATP5A1P25705 553 aaKnown RBP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 TNFSF10P50591 281 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 DDX39BQ13838 428 aaKnown RBP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 CPSF6Q16630 551 aaKnown RBP eCLIP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 DEPDC1Q5TB30 811 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 ABHD17BQ5VST6 288 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 ZNF595Q8IYB9 648 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 ACOT4Q8N9L9 421 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 OR52B6Q8NGF0 335 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 MZB1Q8WU39 189 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 REPS1Q96D71 796 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 NSUN5Q96P11 429 aaKnown RBP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 CSF3RQ99062 836 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 MTERF1Q99551 399 aaKnown RBP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 BARD1Q99728 777 aaKnown RBP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 OR51B5Q9H339 312 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 ANKZF1Q9H8Y5 726 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 KCNK13Q9HB14 408 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 ZBTB26Q9HCK0 441 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 LYRM4Q9HD34 91 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 PRTFDC1Q9NRG1 225 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 ASF1BQ9NVP2 202 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 KCMF1Q9P0J7 381 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 MRPS33Q9Y291 106 aaKnown RBP19.04■□□□□ 0.64
GTF3A-202ENST00000419181 NTNG1Q9Y2I2 539 aa19.04■□□□□ 0.64
GTF3A-202ENST00000419181 RNF11Q9Y3C5 154 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms