RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TRMT61BQ9BVS5 477 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 GATA5Q9BWX5 397 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 FBXO44Q9H4M3 255 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 ESRP2Q9H6T0 727 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 SEBOXQ9HB31 216 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 LY9Q9HBG7 655 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 LRRC4Q9HBW1 653 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF160Q9HCG1 818 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 IL26Q9NPH9 171 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 AKIP1Q9NQ31 210 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 PHPT1Q9NRX4 125 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 RUVBL2Q9Y230 463 aaKnown RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 NFE2L3Q9Y4A8 694 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 EMSYQ7Z589 1322 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 NINLQ9Y2I6 1382 aa4.64□□□□□ -1.67
GABPB1-204ENST00000396464 BAZ1AQ9NRL2 1556 aaPredicted RBP4.64□□□□□ -1.67
GABPB1-204ENST00000396464 TRGV11A0A075B6L2 103 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 GAGE12BA1L429 117 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 GAGE12HA6NDE8 117 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PCP4L1A6NKN8 68 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 C12orf71A8MTZ7 269 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 F8VVB4 439 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 F8VWA3 439 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CLIC1O00299 241 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 POLR1CO15160 346 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 RNMTO43148 476 aaKnown RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 LPXNO60711 386 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 UPK3AO75631 287 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ATP6AP2O75787 350 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 NCR1O76036 304 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 DFFBO76075 338 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CAVIN2O95810 425 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 APOA1P02647 267 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 SFTPBP07988 381 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PRKAR1AP10644 381 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CETPP11597 493 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 MAGEA11P43364 429 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 GPR4P46093 362 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 GPR12P47775 334 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 METAP2P50579 478 aaKnown RBP eCLIP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CLDN15P56746 228 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 SELENOVP59797 346 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 UBE2IP63279 158 aaKnown RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 DMPKQ09013 629 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ASPHQ12797 758 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PKP1Q13835 747 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CAMK4Q16566 473 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 STX1AQ16623 288 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 TATDN3Q17R31 274 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PARP6Q2NL67 630 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF311Q5JNZ3 666 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CTSL3PQ5NE16 218 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PLCXD3Q63HM9 321 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 UGT3A1Q6NUS8 523 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 TTC23LQ6PF05 361 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PLXDC2Q6UX71 529 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 Q6YL49 198 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF600Q6ZNG1 722 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 KCTD8Q6ZWB6 473 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ZNF534Q76KX8 674 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 RD3Q7Z3Z2 195 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ARHGAP22Q7Z5H3 698 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 LHFPL4Q7Z7J7 247 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CROCCP3Q8IVE0 287 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ADGRF4Q8IZF3 695 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 TDHQ8IZJ6 230 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 TMEM132CQ8N3T6 1108 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 SCCPDHQ8NBX0 429 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CPEB3Q8NE35 698 aaKnown RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 TRPV3Q8NET8 790 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 OR4K14Q8NGD5 310 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 OR13F1Q8NGS4 319 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 GRHL3Q8TE85 626 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 GLYATL2Q8WU03 294 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CCDC12Q8WUD4 166 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PHYHIPQ92561 330 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 RFKQ969G6 155 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 COQ2Q96H96 371 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CBWD1Q9BRT8 395 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 MSTO1Q9BUK6 570 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 BBS2Q9BXC9 721 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 TM6SF1Q9BZW5 370 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ANKRA2Q9H9E1 313 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ELOVL3Q9HB03 270 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 SDHAF3Q9NRP4 125 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ACOXLQ9NUZ1 547 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 AHSPQ9NZD4 102 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PLEKHB1Q9UF11 243 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ERRFI1Q9UJM3 462 aaPredicted RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 CDH9Q9ULB4 789 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 TBC1D24Q9ULP9 559 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PIGLQ9Y2B2 252 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 NME7Q9Y5B8 376 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 BZW2Q9Y6E2 419 aaKnown RBP4.63□□□□□ -1.67
GABPB1-204ENST00000396464 ADGRA2Q96PE1 1338 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 SMARCA4P51532 1647 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 A0A0J9YYE9 177 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 PRSS51A0A1B0GVH4 220 aa4.63□□□□□ -1.67
GABPB1-204ENST00000396464 IQCF5A8MTL0 148 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms