RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TREX1Q9NSU2 369 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 GRIP1Q9Y3R0 1128 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 PCDHGB5Q9Y5G0 923 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 DLGAP1O14490 977 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 MID1O15344 667 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 RETP07949 1114 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 C4BP0C0L5 1744 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 C8orf89P0DMQ9 161 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 HOXB2P14652 356 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 IFT52Q9Y366 437 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 A0A1W2PRQ8 180 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 TEX28O15482 410 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 HNRNPA1P09651 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 PPP2R2DQ66LE6 453 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 FBXO42Q6P3S6 717 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 TOMM5Q8N4H5 51 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 CD200R1Q8TD46 325 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 HMGB4Q8WW32 186 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 ZDHHC7Q9NXF8 308 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 PLAGL1Q9UM63 463 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 CNTRLQ7Z7A1 2325 aa16.44■□□□□ 0.22
TRAPPC11-201ENST00000334690 TMEM189-UBE2V1I3L0A0 370 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 SLITRK5O94991 958 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 RPS17P08708 135 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 CYBAP13498 195 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 TSPAN5P62079 268 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 TSPYL5Q86VY4 417 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 OR4K14Q8NGD5 310 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 ASPNQ9BXN1 380 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 A6NHS1 94 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 IFI30P13284 250 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 RHCEP18577 417 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 CBX5P45973 191 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 MARCH8Q5T0T0 291 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 C17orf99Q6UX52 265 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 ERMAPQ96PL5 475 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 TMED9Q9BVK6 235 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 PCDHGB6Q9Y5F9 930 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 A0A0X1KG70 313 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 ZNF821O75541 412 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 SLC10A3P09131 477 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 ITIH1P19827 911 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 SLC6A6P31641 620 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 NRG3P56975 720 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 RAB41Q5JT25 222 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 MORN1Q5T089 497 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 BTN2A1Q7KYR7 527 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 GPALPP1Q8IXQ4 340 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 GNPDA2Q8TDQ7 276 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 PMEPA1Q969W9 287 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 PRRG4Q9BZD6 226 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 GPRC5BQ9NZH0 403 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 ERVK-18Q9QC07 812 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 USP3Q9Y6I4 520 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 STATHP02808 62 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 S100A9P06702 114 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 MAP3K8P41279 467 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 ANKDD1AQ495B1 522 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 MANEALQ5VSG8 457 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 ASB18Q6ZVZ8 466 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 GATA6Q92908 595 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 MGLLQ99685 303 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 DPYSL5Q9BPU6 564 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 KXD1Q9BQD3 176 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 TMEM165Q9HC07 324 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 PAK1IP1Q9NWT1 392 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 TMEM181Q9P2C4 612 aa16.43■□□□□ 0.22
TRAPPC11-201ENST00000334690 AHDC1Q5TGY3 1603 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 ZBTB42B2RXF5 422 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 SLC1A7O00341 560 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 PAK4O96013 591 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 MT-ND5P03915 603 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 ASGR2P07307 311 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 GSTM2P28161 218 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 PUM1Q14671 1186 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 CEP68Q76N32 757 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 NRSN1Q8IZ57 195 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 APCDD1Q8J025 514 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 PROKR2Q8NFJ6 384 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 HUS1BQ8NHY5 278 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 IL26Q9NPH9 171 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 PHF24Q9UPV7 400 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 ISPDA4D126 451 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 GLOD5A6NK44 160 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 FUT4P22083 530 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 DCKP27707 260 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 LETMD1Q6P1Q0 360 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 TTC9BQ8N6N2 239 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 FATE1Q969F0 183 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 DRGXA6NNA5 263 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 PRSS56P0CW18 603 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 EDNRAP25101 427 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 VLDLRP98155 873 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 TRNP1Q6NT89 227 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 DNM1P34Q6PK57 102 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 LARP4Q71RC2 724 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 NRROSQ86YC3 692 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 PXYLP1Q8TE99 480 aa16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 TRUB1Q8WWH5 349 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-201ENST00000334690 BOCQ9BWV1 1114 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms