RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 PLEKHA8Q96JA3 519 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 NIPSNAP1Q9BPW8 284 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 CXorf36Q9H7Y0 433 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 TBC1D23Q9NUY8 699 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 RHCGQ9UBD6 479 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 RNF6Q9Y252 685 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 PCDHGB1Q9Y5G3 927 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 PRAMEF33A0A0G2JMD5 474 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 ANKDD1BA6NHY2 528 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 H7BY64 318 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 LATO43561 262 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 PRAMEF10O60809 474 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 PCDH8O95206 1070 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 VBP1P61758 197 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 CLCA4Q14CN2 919 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 UNC5DQ6UXZ4 953 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 SLC44A2Q8IWA5 706 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 ADGRF3Q8IZF5 1079 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 KRT78Q8N1N4 520 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 OXR1Q8N573 874 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 ABHD11Q8NFV4 315 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 OR10G2Q8NGC3 310 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 OR9Q2Q8NGE9 314 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 NDNFQ8TB73 568 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 PRAP1Q96NZ9 151 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 ZNF300Q96RE9 604 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 OR1A2Q9Y585 309 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 TRPM6Q9BX84 2022 aa17.53■□□□□ 0.4
SHKBP1-201ENST00000291842 KLHL33A6NCF5 533 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 ADAMDEC1O15204 470 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 CXCR4P61073 352 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 CDK3Q00526 305 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 EEF1A2Q05639 463 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 CYP2A13Q16696 494 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 PROX2Q3B8N5 592 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 ADPRMQ3LIE5 342 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 FBXO46Q6PJ61 603 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 LCTLQ6UWM7 567 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 C17orf64Q86WR6 236 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 PLD3Q8IV08 490 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 DCUN1D3Q8IWE4 304 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 SNRNP27Q8WVK2 155 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 LZICQ8WZA0 190 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 KLK6Q92876 244 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 ARMC5Q96C12 935 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 COX14Q96I36 57 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 HRASLS5Q96KN8 279 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 SLAMF7Q9NQ25 335 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 DNAH14Q0VDD8 3507 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 CCDC88CQ9P219 2028 aa17.52■□□□□ 0.4
SHKBP1-201ENST00000291842 A0A0G2JN53 185 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 M0R129 80 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 LCKP06239 509 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 CCR3P51677 355 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 EIF4HQ15056 248 aaKnown RBP17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 WSCD2Q2TBF2 565 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 RPS26P11Q5JNZ5 115 aaPredicted RBP17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 C10orf62Q5T681 223 aaPredicted RBP17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 PIP5KL1Q5T9C9 394 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 EGFLAMQ63HQ2 1017 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 FAM109BQ6ICB4 259 aaPredicted RBP17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 LGI4Q8N135 537 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 UBE2E3Q969T4 207 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 PITX2Q99697 317 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 ACOT13Q9NPJ3 140 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 SELENONQ9NZV5 590 aa17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 NUP210Q8TEM1 1887 aaPredicted RBP17.52■□□□□ 0.39
SHKBP1-201ENST00000291842 C1QTNF3-AMACRE9PGA6 284 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 PCDH17O14917 1159 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 CA3P07451 260 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 TGFBR1P36897 503 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 RPL3P39023 403 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 IDH2P48735 452 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 MAPK12P53778 367 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 MVKQ03426 396 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 FADDQ13158 208 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 TANGO2Q6ICL3 276 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 TNFAIP8L2Q6P589 184 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 LRRTM4Q86VH4 590 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 DRAXINQ8NBI3 349 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 UCN3Q969E3 161 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 GABARAPL3Q9BY60 117 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 TMEM38AQ9H6F2 299 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 MBNL1Q9NR56 388 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 MUC22E2RYF6 1773 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 ATG2BQ96BY7 2078 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 PRR23AA6NEV1 266 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 C5orf67F2Z3F1 127 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 MID1O15344 667 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 DPM1O60762 260 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 STATHP02808 62 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 DRD3P35462 400 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 OPRL1P41146 370 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 CLCNKAP51800 687 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 DGKEP52429 567 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 NUDT6P53370 316 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 RBBP4Q09028 425 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 DUSP7Q16829 419 aa17.51■□□□□ 0.39
SHKBP1-201ENST00000291842 KHDRBS2Q5VWX1 349 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms