RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 DMC1Q14565 340 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ADIPOQQ15848 244 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 SYT16Q17RD7 645 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CCDC40Q4G0X9 1142 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 SPDYCQ5MJ68 293 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 EOGTQ5NDL2 527 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 MPP7Q5T2T1 576 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 LRIF1Q5T3J3 769 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 KLHL10Q6JEL2 608 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM270Q6UE05 265 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 GLDNQ6ZMI3 551 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 RBM43Q6ZSC3 357 aaKnown RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 C9orf139Q6ZV77 190 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 TRMT11Q7Z4G4 463 aaKnown RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 TBC1D1Q86TI0 1168 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM25Q86YD3 366 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 DCLK2Q8N568 766 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF557Q8N988 423 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 IL17RCQ8NAC3 791 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACVR1CQ8NER5 493 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 OR5R1Q8NH85 324 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 SECTM1Q8WVN6 248 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 PIGTQ969N2 578 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 WBP2Q969T9 261 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 QRFPRQ96P65 431 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 XPO6Q96QU8 1125 aaKnown RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ITPAQ9BY32 194 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC2A11Q9BYW1 496 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 NACA2Q9H009 215 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CLSTN2Q9H4D0 955 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 THAP9Q9H5L6 903 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 KLHL1Q9NR64 748 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ABCC13Q9NSE7 274 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 DONSONQ9NYP3 566 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 DEC1Q9P2X7 70 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 COPG2Q9UBF2 871 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 FBXL2Q9UKC9 423 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 RALYQ9UKM9 306 aaKnown RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CORO1CQ9ULV4 474 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ICAM5Q9UMF0 924 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 R3HDM2Q9Y2K5 976 aaKnown RBP3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF711Q9Y462 761 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 LAMA1P25391 3075 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 CHD8Q9HCK8 2581 aa3.46□□□□□ -1.86
CKS1BP3-201ENST00000600888 ASPDHA6ND91 283 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 YJEFN3A6XGL0 299 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 FAM90A26D6RGX4 464 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 E7ENQ6 273 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 NEDD8-MDP1E9PL57 170 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SGK1O00141 431 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SLC30A4O14863 429 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SCAMP1O15126 338 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 KCNN4O15554 427 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 MED7O43513 233 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 TIMM44O43615 452 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 RHOBTB1O94844 696 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ZNF432O94892 652 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 FYNP06241 537 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ITGA2P17301 1181 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 PON1P27169 355 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 HOXC13P31276 330 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ARL3P36405 182 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 P2RY2P41231 377 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ACADSBP45954 432 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 GALCP54803 685 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 MFAP3P55082 362 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 STX17P56962 302 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 KRTAP10-9P60411 292 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ISL1P61371 349 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 DCAF7P61962 342 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ARL16Q0P5N6 197 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ADIGQ0VDE8 80 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 LRMPQ12912 555 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 CDC16Q13042 620 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SRSF5Q13243 272 aaKnown RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 EIF4EBP2Q13542 120 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 EXOC3L4Q17RC7 722 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 PNLIPRP3Q17RR3 467 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 GOLGA7BQ2TAP0 167 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 MPPE1Q53F39 396 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 C10orf120Q5SQS8 335 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 IRAK1BP1Q5VVH5 260 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 BSPRYQ5W0U4 402 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 PMS2CLQ68D20 193 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 C18orf63Q68DL7 685 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 PMF1Q6P1K2 205 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 KLHL35Q6PF15 583 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 TRIM65Q6PJ69 517 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 GBP6Q6ZN66 633 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 FOXL2NBQ6ZUU3 175 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 IKBIPQ70UQ0 350 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 TMEM110Q86TL2 294 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 CUZD1Q86UP6 607 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 KMT5CQ86Y97 462 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 FAM114A1Q8IWE2 563 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 UNC45BQ8IWX7 931 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 SIX6OS1Q8N1H7 587 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 ALLCQ8N6M5 410 aa3.45□□□□□ -1.86
CKS1BP3-201ENST00000600888 TSTD1Q8NFU3 115 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms