RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PRR23BQ6ZRT6 265 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 ZDHHC13Q8IUH4 622 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 GRAMD2AQ8IUY3 354 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PLD3Q8IV08 490 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 MSRB3Q8IXL7 192 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 OR8J3Q8NGG0 315 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 WDR20Q8TBZ3 569 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 NEIL2Q969S2 332 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 CCDC90BQ9GZT6 254 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 SGK2Q9HBY8 427 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 STMN3Q9NZ72 180 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PPT2Q9UMR5 302 aa16.39■□□□□ 0.21
SHKBP1-205ENST00000594973 PDZK1P1A8MUH7 402 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 HAT1O14929 419 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 PCDH8O95206 1070 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 APOA1P02647 267 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 PCNAP12004 261 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 S100A3P33764 101 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 UGT2B10P36537 528 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 SEPHS1P49903 392 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 ST13P50502 369 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 TBPL1P62380 186 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 PHACTR4Q8IZ21 702 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 OR56A3Q8NH54 315 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 FBLIM1Q8WUP2 373 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 LGALS12Q96DT0 336 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 ZNF583Q96ND8 569 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 CDCA3Q99618 268 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 TMEM246Q9BRR3 403 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 TBCDQ9BTW9 1192 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 HDAC8Q9BY41 377 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 LMAN2LQ9H0V9 348 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 VPS29Q9UBQ0 182 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 WBP11Q9Y2W2 641 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 STON1Q9Y6Q2 735 aa16.38■□□□□ 0.21
SHKBP1-205ENST00000594973 ZSCAN5BA6NJL1 495 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 UGDHO60701 494 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 TPPPO94811 219 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 SNX4O95219 450 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 RAP2AP10114 183 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 AGXTP21549 392 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 PRPH2P23942 346 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 MAPK1P28482 360 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 DRD3P35462 400 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 NUDT1P36639 197 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 DDOSTP39656 456 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 HTR3AP46098 478 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 SEC13P55735 322 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 CYP4F3Q08477 520 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 HYAL1Q12794 435 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 ZNF404Q494X3 552 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 FAM83HQ6ZRV2 1179 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 TMPRSS11BQ86T26 416 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 GALNT12Q8IXK2 581 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 METTL4Q8N3J2 472 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 AADATQ8N5Z0 425 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 NSMCE2Q96MF7 247 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 IRF2BPLQ9H1B7 796 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 DDX28Q9NUL7 540 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 PCDHB14Q9Y5E9 798 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 COL4A3Q01955 1670 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 MAGEB17A8MXT2 336 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 MAPK9P45984 424 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 LSM3P62310 102 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 PRKCDQ05655 676 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 ZNF691Q5VV52 312 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 GRHL2Q6ISB3 625 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 ANKRD54Q6NXT1 300 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 GDPD3Q7L5L3 318 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 SYT12Q8IV01 421 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 UBQLNLQ8IYU4 475 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 ELMOD2Q8IZ81 293 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 OR2T12Q8NG77 320 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 REXO5Q96IC2 774 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 MAGEB10Q96LZ2 347 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 INPP5KQ9BT40 448 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 LGR4Q9BXB1 951 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 AMBRA1Q9C0C7 1298 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 MAGEL2Q9UJ55 1249 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 MSRAQ9UJ68 235 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 GPSM3Q9Y4H4 160 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 KCNE2Q9Y6J6 123 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 DNAH14Q0VDD8 3507 aa16.37■□□□□ 0.21
SHKBP1-205ENST00000594973 CLDN24A6NM45 220 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 G3V2T6 193 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 ZW10O43264 779 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 MRPS14O60783 128 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 ETHE1O95571 254 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 ALDH4A1P30038 563 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 NCS1P62166 190 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 RACK1P63244 317 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 MVKQ03426 396 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 FAM46CQ5VWP2 391 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 GCNT7Q6ZNI0 430 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 SLC38A6Q8IZM9 456 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 SVOPLQ8N434 492 aa16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 C2orf73Q8N5S3 287 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-205ENST00000594973 KAT8Q9H7Z6 458 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms