RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 LHX3Q9UBR4 397 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.67■□□□□ 0.26
PTPN21-208ENST00000556564 PRSS51A0A1B0GVH4 220 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 CCNIQ14094 377 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 KCTD8Q6ZWB6 473 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 PEG10Q86TG7 708 aaKnown RBP16.67■□□□□ 0.26
PTPN21-208ENST00000556564 UBASH3BQ8TF42 649 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 SPIN1Q9Y657 262 aaPredicted RBP16.67■□□□□ 0.26
PTPN21-208ENST00000556564 M0QX08 132 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 STEAP4Q687X5 459 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 PIGWQ7Z7B1 504 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 ACVR1CQ8NER5 493 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 POMPQ9Y244 141 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 FAM92AA1XBS5 289 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 BLOC1S5-TXNDC5H3BN57 136 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 GRM7Q14831 915 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 OR5K1Q8NHB7 308 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 B3GAT2Q9NPZ5 323 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 CRNNQ9UBG3 495 aaPredicted RBP16.67■□□□□ 0.26
PTPN21-208ENST00000556564 DNAJB9Q9UBS3 223 aa16.67■□□□□ 0.26
PTPN21-208ENST00000556564 RGS10O43665 173 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 PRKD3O94806 890 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 SLC16A8O95907 504 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 EIF1AXP47813 144 aaKnown RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 GRB7Q14451 532 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 GBX1Q14549 363 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 MBTPS1Q14703 1052 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ZNF789Q5FWF6 425 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ASPNQ9BXN1 380 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 KCNK13Q9HB14 408 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 NOX1Q9Y5S8 564 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 LAMB2P55268 1798 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 CLEC3AO75596 197 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 SLC6A9P48067 706 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 NSDHLQ15738 373 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 TMPRSS9Q7Z410 1059 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 LRRC25Q8N386 305 aaPredicted RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 KBTBD8Q8NFY9 601 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 DAZLQ92904 295 aaKnown RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ZSWIM3Q96MP5 696 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 RHCGQ9UBD6 479 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 TP53I11O14683 189 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ANGPTL1O95841 491 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 H1F0P07305 194 aaKnown RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 C1SP09871 688 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 IGFBP6P24592 240 aaPredicted RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 CSNK1EP49674 416 aaKnown RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 DIO3P55073 304 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 RSPO2Q6UXX9 243 aaPredicted RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ADAMTS19Q8TE59 1207 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ZBTB26Q9HCK0 441 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 STOX2Q9P2F5 926 aaPredicted RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 E7ESA3 106 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 GPR39O43194 453 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 RPA4Q13156 261 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 KLHL17Q6TDP4 642 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 CLIP4Q8N3C7 705 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 BCL7CQ8WUZ0 217 aaPredicted RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 HIST1H2AAQ96QV6 131 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 BRD7Q9NPI1 651 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 IL17CQ9P0M4 197 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 PRSS21Q9Y6M0 314 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 EME2A4GXA9 379 aaPredicted RBP16.66■□□□□ 0.26
PTPN21-208ENST00000556564 DIRAS1O95057 198 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 ZNF3P17036 446 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 TMEM184CQ9NVA4 438 aa16.66■□□□□ 0.26
PTPN21-208ENST00000556564 A6NL46 340 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 HCRTR2O43614 444 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 MPZL2O60487 215 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 HOXC13P31276 330 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 MANEALQ5VSG8 457 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 KLHDC8AQ8IYD2 350 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTPN21-208ENST00000556564 COMMD4Q9H0A8 199 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 HCN4Q9Y3Q4 1203 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 C1orf226A1L170 272 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 IDH3BO43837 385 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 SIM1P81133 766 aaPredicted RBP16.65■□□□□ 0.26
PTPN21-208ENST00000556564 PTGR1Q14914 329 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 NANOGNBQ7Z5D8 188 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 ZBTB46Q86UZ6 589 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 RELL1Q8IUW5 271 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 LGI4Q8N135 537 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 SLC39A13Q96H72 371 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 DENND2DQ9H6A0 471 aaPredicted RBP16.65■□□□□ 0.26
PTPN21-208ENST00000556564 MTMR10Q9NXD2 777 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 C9P02748 559 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 OR52B6Q8NGF0 335 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 MAFAQ8NHW3 353 aaPredicted RBP16.65■□□□□ 0.26
PTPN21-208ENST00000556564 ZFYVE21Q9BQ24 234 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 CENPMQ9NSP4 180 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 PPP4R1LQ9P1A2 415 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 C6orf136Q5SQH8 315 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 TRNP1Q6NT89 227 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 GPAT4Q86UL3 456 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 PDZD3Q86UT5 571 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 OR52E1Q8NGJ3 308 aa16.65■□□□□ 0.26
PTPN21-208ENST00000556564 ECDO95905 644 aaPredicted RBP16.65■□□□□ 0.26
PTPN21-208ENST00000556564 PDX1P52945 283 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms