RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RNH1P13489 461 aaKnown RBP11.14□□□□□ -0.63
RAB5C-204ENST00000547517 ZNF10P21506 573 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-204ENST00000547517 IL10P22301 178 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 CERS1P27544 350 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 HSD17B3P37058 310 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 CASRP41180 1078 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 CD97P48960 835 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 SOX8P57073 446 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 RHAGQ02094 409 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 TLE1Q04724 770 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 TGM3Q08188 693 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 ADPRMQ3LIE5 342 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 CPEB2Q7Z5Q1 589 aaKnown RBP11.14□□□□□ -0.63
RAB5C-204ENST00000547517 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 KBTBD2Q8IY47 623 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 LAS2Q8IYD9 372 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 CA13Q8N1Q1 262 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 RNF175Q8N4F7 328 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 AMER2Q8N7J2 671 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 OR7G3Q8NG95 312 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 ZNF473Q8WTR7 871 aaKnown RBP11.14□□□□□ -0.63
RAB5C-204ENST00000547517 MZB1Q8WU39 189 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 NSUN5Q96P11 429 aaKnown RBP11.14□□□□□ -0.63
RAB5C-204ENST00000547517 CDK15Q96Q40 435 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 MS4A8Q9BY19 250 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 LHPPQ9H008 270 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 NOL11Q9H8H0 719 aaKnown RBP11.14□□□□□ -0.63
RAB5C-204ENST00000547517 TMEM216Q9P0N5 145 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 PCTPQ9UKL6 214 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 NAV2Q8IVL1 2488 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 A0A1W2PPM1 405 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 MAGEB17A8MXT2 336 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 FOXO6A8MYZ6 492 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 FAM227AF5H4B4 570 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 J3QKU1 62 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 SAP18O00422 153 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 OR7A17O14581 309 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 KLHL41O60662 606 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 UGDHO60701 494 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 TGFB1P01137 390 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 RPS17P08708 135 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 SBK3P0C264 359 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 PRR35P0CG20 571 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 KRT15P19012 456 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 MAOAP21397 527 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 SERPINB1P30740 379 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 CCNG1P51959 295 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 MTTPP55157 894 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 PHEXP78562 749 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 PCDH1Q08174 1060 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 RUNX2Q13950 521 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 NSDHLQ15738 373 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 CPSF6Q16630 551 aaKnown RBP eCLIP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 AGAP7PQ5VUJ5 663 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 LIPJQ5W064 366 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 SLC6A19Q695T7 634 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 METTL2BQ6P1Q9 378 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 ABHD17CQ6PCB6 329 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 RPS27LQ71UM5 84 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 RBMXL3Q8N7X1 1067 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 FAM47BQ8NA70 645 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 OR52B6Q8NGF0 335 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 HUS1BQ8NHY5 278 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 BRIX1Q8TDN6 353 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 ACMSDQ8TDX5 336 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 TM9SF4Q92544 642 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 ATP6V1E2Q96A05 226 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 AGAP4Q96P64 663 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 QRFPRQ96P65 431 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 KCNC2Q96PR1 638 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 SERINC2Q96SA4 455 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 MTERF1Q99551 399 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 TUBB6Q9BUF5 446 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 PPCSQ9HAB8 311 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 CLK4Q9HAZ1 481 aaKnown RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 ZBTB20Q9HC78 741 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 SEMA4BQ9NPR2 832 aaPredicted RBP11.13□□□□□ -0.63
RAB5C-204ENST00000547517 DMRT3Q9NQL9 472 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 C5AR2Q9P296 337 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 RNF11Q9Y3C5 154 aa11.13□□□□□ -0.63
RAB5C-204ENST00000547517 RTCAO00442 366 aaKnown RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 CLDN9O95484 217 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 SERPINA7P05543 415 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 ITGAMP11215 1152 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 TSPAN8P19075 237 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 TAC1P20366 129 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 SSR2P43308 183 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 RAP1GDS1P52306 607 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 RAB38P57729 211 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 OR4D2P58180 307 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 RPS13P62277 151 aaKnown RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 BTG2P78543 158 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 TRAF3Q13114 568 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 ZRSR2Q15696 482 aaKnown RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 TMEM35AQ53FP2 167 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 SFT2D3Q587I9 215 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 KHDRBS2Q5VWX1 349 aaKnown RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 PAPD4Q6PIY7 484 aaKnown RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 ZNF793Q6ZN11 406 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms