RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CYP17A1P05093 508 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 DAB2P98082 770 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 CPTPQ5TA50 214 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 FRMPD2BQ6IN97 320 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 UBE2R2Q712K3 238 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-205ENST00000539661 DDX53Q86TM3 631 aaKnown RBP16.89■□□□□ 0.29
RAB40C-205ENST00000539661 ENKURQ8TC29 256 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 GEMIN6Q8WXD5 167 aaKnown RBP16.89■□□□□ 0.29
RAB40C-205ENST00000539661 RNF31Q96EP0 1072 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 ZC3HAV1LQ96H79 300 aaKnown RBP16.89■□□□□ 0.29
RAB40C-205ENST00000539661 TMEM80Q96HE8 168 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 COPS8Q99627 209 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.89■□□□□ 0.291e-10■■■■■ 39.4
RAB40C-205ENST00000539661 ACER3Q9NUN7 267 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 DNAJC11Q9NVH1 559 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 SLC6A14Q9UN76 642 aa16.89■□□□□ 0.29
RAB40C-205ENST00000539661 NUP214P35658 2090 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-205ENST00000539661 LINC00854A0A1B0GVQ3 168 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 PROM1O43490 865 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 UGDHO60701 494 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 ALPIP09923 528 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 HIST1H2AGP0C0S8 130 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-205ENST00000539661 HIST1H2ADP20671 130 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 SOX3P41225 446 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 XCR1P46094 333 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 MLLT11Q13015 90 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-205ENST00000539661 TMEM201Q5SNT2 666 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 CCNJQ5T5M9 372 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 RNF219Q5W0B1 726 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-205ENST00000539661 LYPD8Q6UX82 237 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 FAM92BQ6ZTR7 304 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 CREB3L2Q70SY1 520 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 CREB3L4Q8TEY5 395 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 UBASH3BQ8TF42 649 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 PIH1D2Q8WWB5 315 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 HIST1H2AHQ96KK5 128 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 HIST1H2AJQ99878 128 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 H2AFJQ9BTM1 129 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 ABCB9Q9NP78 766 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 DNMT3LQ9UJW3 386 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 GLYATL1P3A0A0U1RQE8 302 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 PCDH7O60245 1069 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 TMCC2O75069 709 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 CNR2P34972 360 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 CA8P35219 290 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 KIR2DL3P43628 341 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF157P51786 506 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-205ENST00000539661 VEPH1Q14D04 833 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 FAM110CQ1W6H9 321 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 ZXDCQ2QGD7 858 aaPredicted RBP16.88■□□□□ 0.29
RAB40C-205ENST00000539661 PTCHD3Q3KNS1 767 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 LIPJQ5W064 366 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 SAXO2Q658L1 398 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 NXPE1Q8N323 547 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 YIPF7Q8N8F6 280 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 C2orf69Q8N8R5 385 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 SPERTQ8NA61 448 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 IL17RCQ8NAC3 791 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 SNAPC3Q92966 411 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 CLIP3Q96DZ5 547 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 VPS35Q96QK1 796 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 MIXL1Q9H2W2 232 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 CWH43Q9H720 699 aa16.88■□□□□ 0.29
RAB40C-205ENST00000539661 A0A0X1KG70 313 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 TPST2O60704 377 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 TNFRSF1BP20333 461 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 NSG1P42857 185 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 GAB1Q13480 694 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 GPR19Q15760 415 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 KLHL17Q6TDP4 642 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 SERINC5Q86VE9 423 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 PROKR2Q8NFJ6 384 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 GTPBP3Q969Y2 492 aaKnown RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 C11orf24Q96F05 449 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 ADAM2Q99965 735 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 GTPBP2Q9BX10 602 aaKnown RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 SPATA6Q9NWH7 488 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 NDOR1Q9UHB4 597 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 FADS2P1A8MWK0 482 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 PCDH17O14917 1159 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 POLR1CO15160 346 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 HCN1O60741 890 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 TNFRSF21O75509 655 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 GADD45GO95257 159 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 IFNA14P01570 189 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 OPN1SWP03999 348 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 ATP5C1P36542 298 aaKnown RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 OR1E2P47887 323 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 ACSM2AQ08AH3 577 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 TAF1CQ15572 869 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 TRIM71Q2Q1W2 868 aaKnown RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 DDI2Q5TDH0 399 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 LCN1P1Q5VSP4 162 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 ACSM2BQ68CK6 577 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 PLET1Q6UQ28 207 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 ZNF783Q6ZMS7 281 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 LAS2Q8IYD9 372 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 CBARPQ8N350 705 aaPredicted RBP16.87■□□□□ 0.29
RAB40C-205ENST00000539661 NANOGP1Q8N7R0 232 aa16.87■□□□□ 0.29
RAB40C-205ENST00000539661 AQP11Q8NBQ7 271 aa16.87■□□□□ 0.29
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