RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 FRMD7Q6ZUT3 714 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 CROCCP2Q86T23 111 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 CA13Q8N1Q1 262 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 AMER2Q8N7J2 671 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 OR2L5Q8NG80 312 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 ARL8AQ96BM9 186 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 REPS1Q96D71 796 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 CMTM7Q96FZ5 175 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 SEC16BQ96JE7 1060 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 FAR2Q96K12 515 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 CRB3Q9BUF7 120 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 WDR54Q9H977 334 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 MKKSQ9NPJ1 570 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-224ENST00000523873 PRDM7Q9NQW5 492 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 ARGLU1Q9NWB6 273 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-224ENST00000523873 TIMM22Q9Y584 194 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 FAM227AF5H4B4 570 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 TRIM13O60858 407 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 DNAJB5O75953 348 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 MLYCDO95822 493 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 CD63P08962 238 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 CHN1P15882 459 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 SERPINB1P30740 379 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 PIK3CBP42338 1070 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 MAGOHP61326 146 aaKnown RBP12.11□□□□□ -0.47
VEGFA-224ENST00000523873 PHEXP78562 749 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 IFT88Q13099 833 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 SSPNQ14714 243 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 LINC00303Q3SY05 128 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 MINDY4Q4G0A6 757 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 DEPDC1Q5TB30 811 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 FRG2Q64ET8 278 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 SCIMPQ6UWF3 145 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 ATG14Q6ZNE5 492 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 MRGPREQ86SM8 312 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 RAB43Q86YS6 212 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 ANKRD42Q8N9B4 389 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 SELENOMQ8WWX9 145 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 TTC9Q92623 222 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 C8orf44Q96CB5 159 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 TLCD1Q96CP7 247 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 FRG2BQ96QU4 278 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 ELOVL6Q9H5J4 265 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 COPS7BQ9H9Q2 264 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-224ENST00000523873 C3orf18Q9UK00 162 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 NXT1Q9UKK6 140 aaKnown RBP12.11□□□□□ -0.47
VEGFA-224ENST00000523873 MKL2Q9ULH7 1088 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 POLHQ9Y253 713 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 MAN2B2Q9Y2E5 1009 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 TSC22D4Q9Y3Q8 395 aa12.11□□□□□ -0.47
VEGFA-224ENST00000523873 GOLGA6L10A6NI86 522 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 IDSB3KWA1 339 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 MANBAO00462 879 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 PLPP1O14494 284 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 SOCS6O14544 535 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 B3GALT2O43825 422 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 B4GALT2O60909 372 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 RECKO95980 971 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 CHRNGP07510 517 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 HEXBP07686 556 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 BPGMP07738 259 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 SERPINB3P29508 390 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 HMOX2P30519 316 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 SERPINB4P48594 390 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 RAP1GDS1P52306 607 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 HNRNPFP52597 415 aaKnown RBP12.1□□□□□ -0.47
VEGFA-224ENST00000523873 EMP2P54851 167 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 MTTPP55157 894 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 PKNOX1P55347 436 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 EEF1A2Q05639 463 aaKnown RBP12.1□□□□□ -0.47
VEGFA-224ENST00000523873 CRTC2Q53ET0 693 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-224ENST00000523873 CES4AQ5XG92 561 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 LANCL3Q6ZV70 420 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 CHSY3Q70JA7 882 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 HDXQ7Z353 690 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 FAM47BQ8NA70 645 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 MGARPQ8TDB4 240 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 TSLPQ969D9 159 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 CSF3RQ99062 836 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 TRIM55Q9BYV6 548 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 TGIF2Q9GZN2 237 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 VN1R1Q9GZP7 353 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 SSU72Q9NP77 194 aaKnown RBP12.1□□□□□ -0.47
VEGFA-224ENST00000523873 LANCL2Q9NS86 450 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 C14orf105Q9NVL8 296 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 ADGRE2Q9UHX3 823 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 SNX6Q9UNH7 406 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 FIS1Q9Y3D6 152 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 ACTL7BQ9Y614 415 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 HS3ST3B1Q9Y662 390 aa12.1□□□□□ -0.47
VEGFA-224ENST00000523873 KMT2BQ9UMN6 2715 aaPredicted RBP12.1□□□□□ -0.47
VEGFA-224ENST00000523873 LAMA5O15230 3695 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 UQCRHLA0A096LP55 91 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 IGHV3-20A0A0C4DH32 117 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 TMEM120BA0PK00 339 aa12.09□□□□□ -0.47
VEGFA-224ENST00000523873 FOXE1O00358 373 aaPredicted RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 EEDO75530 441 aaKnown RBP12.09□□□□□ -0.47
VEGFA-224ENST00000523873 SASH3O75995 380 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms