RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 CDC123O75794 336 aaPredicted RBP6.5□□□□□ -1.37
NUP54-215ENST00000514313 ANPEPP15144 967 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 RPL35AP18077 110 aaKnown RBP6.5□□□□□ -1.37
NUP54-215ENST00000514313 AKT2P31751 481 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 SGCGQ13326 291 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 GRB14Q14449 540 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 PTPN14Q15678 1187 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 DUSP5Q16690 384 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 ZNF718Q3SXZ3 478 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 CEACAM20Q6UY09 585 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 MACC1Q6ZN28 852 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 NIPA2Q8N8Q9 360 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 OR13C5Q8NGS8 318 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 SUSD6Q92537 303 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 GLYATL1Q969I3 302 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 SLC35C1Q96A29 364 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 ESAMQ96AP7 390 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 NUSAP1Q9BXS6 441 aaKnown RBP6.5□□□□□ -1.37
NUP54-215ENST00000514313 SIRPDQ9H106 197 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 MMP28Q9H239 520 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 MAN2C1Q9NTJ4 1040 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 SOHLH2Q9NX45 425 aa6.5□□□□□ -1.37
NUP54-215ENST00000514313 A0A087WZ39 114 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 FAM172BPA6NC97 362 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 SRRM4A7MD48 611 aaKnown RBP6.49□□□□□ -1.37
NUP54-215ENST00000514313 ERVK-10P10266 1014 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 KRT5P13647 590 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 CHRNA3P32297 505 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 OR3A2P47893 321 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 DLX5P56178 289 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 LINC01547P58512 204 aaPredicted RBP6.49□□□□□ -1.37
NUP54-215ENST00000514313 POU3F1Q03052 451 aaPredicted RBP6.49□□□□□ -1.37
NUP54-215ENST00000514313 ZRSR1Q15695 479 aaKnown RBP6.49□□□□□ -1.37
NUP54-215ENST00000514313 LYPLAL1Q5VWZ2 237 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 SLC35E4Q6ICL7 350 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 ADCK1Q86TW2 530 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 ZBTB44Q8NCP5 570 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 ZNF524Q96C55 264 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 NECTIN4Q96NY8 510 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 ASCL2Q99929 193 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 SPAG8Q99932 426 aaPredicted RBP6.49□□□□□ -1.37
NUP54-215ENST00000514313 NYXQ9GZU5 481 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 ZNF665Q9H7R5 613 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 NGBQ9NPG2 151 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 SLC52A3Q9NQ40 469 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 ACOXLQ9NUZ1 547 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 FAM153AQ9UHL3 310 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 NARFQ9UHQ1 456 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 PLEKHA6Q9Y2H5 1048 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 ATP8B3O60423 1300 aa6.49□□□□□ -1.37
NUP54-215ENST00000514313 A0A0G2JLW4 131 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 ATP6AP2A0A1C7CYW4 349 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 MSGN1A6NI15 193 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 LRP3O75074 770 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 SOCS5O75159 536 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 OR6B1O95007 311 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 CPNE6O95741 557 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 GUCA1CO95843 209 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 EPOP01588 193 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 SFTPBP07988 381 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 ARF4P18085 180 aaPredicted RBP6.48□□□□□ -1.37
NUP54-215ENST00000514313 ACKR3P25106 362 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 CTNNA2P26232 953 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 BTG1P62324 171 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 HERV-K104P63124 156 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 CNTN1Q12860 1018 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 FAM76BQ5HYJ3 339 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 TCEAL6Q6IPX3 200 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 ZNF790Q6PG37 636 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 TMEM64Q6YI46 380 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 OR10V1Q8NGI7 309 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 CHURC1Q8WUH1 139 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 GATAD1Q8WUU5 269 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 C16orf58Q96GQ5 468 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 C16orf45Q96MC5 204 aaPredicted RBP6.48□□□□□ -1.37
NUP54-215ENST00000514313 TSGA13Q96PP4 275 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 PCDHB18PQ96TA0 734 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 TRPV6Q9H1D0 765 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 ZNF71Q9NQZ8 489 aaPredicted RBP6.48□□□□□ -1.37
NUP54-215ENST00000514313 DBF4Q9UBU7 674 aaPredicted RBP6.48□□□□□ -1.37
NUP54-215ENST00000514313 AURKCQ9UQB9 309 aa6.48□□□□□ -1.37
NUP54-215ENST00000514313 IGKV2D-30A0A075B6S6 120 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 A0A0U1RRA0 63 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 KPNA7A9QM74 516 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 OGTO15294 1046 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 VTNP04004 478 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 PRSS1P07477 247 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 PRKAR1AP10644 381 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 ASMTP46597 345 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 HSD17B7P56937 341 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 CCZ1BP86790 482 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 CCZ1P86791 482 aaPredicted RBP6.47□□□□□ -1.37
NUP54-215ENST00000514313 HERC4Q5GLZ8 1057 aaPredicted RBP6.47□□□□□ -1.37
NUP54-215ENST00000514313 CYP4V2Q6ZWL3 525 aaPredicted RBP6.47□□□□□ -1.37
NUP54-215ENST00000514313 LACC1Q8IV20 430 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 SLC43A2Q8N370 569 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 CCDC185Q8N715 623 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 TMEM178AQ8NBL3 297 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 LEMD2Q8NC56 503 aa6.47□□□□□ -1.37
NUP54-215ENST00000514313 ZNRF4Q8WWF5 429 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms