RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CLEC18AA5D8T8 446 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 LRRC14BA6NHZ5 514 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 SYCE1LA8MT33 242 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 PRMT3O60678 531 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 F10P00742 488 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 UQCRHP07919 91 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 RHOXF2BP0C7M4 288 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 MAOAP21397 527 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 MSH2P43246 934 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 MAGEA12P43365 314 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 PLA2G16P53816 162 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 OR4D2P58180 307 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 AP2B1P63010 937 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 ACTN3Q08043 901 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-209ENST00000484305 PCDH1Q08174 1060 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 LAPTM5Q13571 262 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF169Q14929 603 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-209ENST00000484305 SETDB1Q15047 1291 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 TLR1Q15399 786 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 HIST2H2ACQ16777 129 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-209ENST00000484305 PFKFB4Q16877 469 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 HIST2H2AA3Q6FI13 130 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 KLC3Q6P597 504 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 PAPD4Q6PIY7 484 aaKnown RBP12.12□□□□□ -0.47
HDAC1-209ENST00000484305 CLEC18BQ6UXF7 455 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 QSOX2Q6ZRP7 698 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 CLEC18CQ8NCF0 446 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 LRRN4CLQ8ND94 238 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 OR2L5Q8NG80 312 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 OR1N1Q8NGS0 311 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 HAS2Q92819 552 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 ISL2Q96A47 359 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 MAGEB10Q96LZ2 347 aaPredicted RBP12.12□□□□□ -0.47
HDAC1-209ENST00000484305 QRFPRQ96P65 431 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 F2RL3Q96RI0 385 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 RHOXF2Q9BQY4 288 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
HDAC1-209ENST00000484305 COPG1Q9Y678 874 aaKnown RBP12.12□□□□□ -0.47
HDAC1-209ENST00000484305 IKBKGQ9Y6K9 419 aa12.12□□□□□ -0.47
HDAC1-209ENST00000484305 A0A087WUV0 522 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 IGKV3D-11A0A0A0MRZ8 115 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 CCDC189A1A4V9 331 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 DYTNA2CJ06 578 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 A8MUI8 341 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 PSMD12O00232 456 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 KLK8O60259 260 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 WDPCPO95876 746 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 FAM153BP0C7A2 387 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 GFAPP14136 432 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 EPB42P16452 691 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 TSFMP43897 325 aaKnown RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 SERPINB9P50453 376 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 ALDH18A1P54886 795 aaKnown RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 ARG2P78540 354 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF33BQ06732 778 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 UBAP2LQ14157 1087 aaKnown RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 NAA30Q147X3 362 aaPredicted RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 NR6A1Q15406 480 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 EXT1Q16394 746 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 FAM153CQ494X1 144 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 TECRLQ5HYJ1 363 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 PAGE2BQ5JRK9 111 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 H3F3CQ6NXT2 135 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 TRIM40Q6P9F5 258 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 ABHD17CQ6PCB6 329 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 LAS2Q8IYD9 372 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 M1APQ8TC57 530 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF473Q8WTR7 871 aaKnown RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 LPAR4Q99677 370 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 BARD1Q99728 777 aaKnown RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 NECTIN3Q9NQS3 549 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 PRDM9Q9NQV7 894 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 STMN3Q9NZ72 180 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
HDAC1-209ENST00000484305 ZNF180Q9UJW8 692 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 SVILO95425 2214 aa12.11□□□□□ -0.47
HDAC1-209ENST00000484305 PTPN13Q12923 2485 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 TCRBV16S1A1N1A0A5B0 115 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 TRIM49D1C9J1S8 452 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 B3GALT2O43825 422 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 SH3BGRLO75368 114 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 KRT38O76015 456 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 SIX3O95343 332 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-209ENST00000484305 CBX6O95503 412 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 PCNAP12004 261 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 CERS1P27544 350 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 GCAP28676 217 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
HDAC1-209ENST00000484305 TNFSF10P50591 281 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 HNRNPFP52597 415 aaKnown RBP12.1□□□□□ -0.47
HDAC1-209ENST00000484305 RAB38P57729 211 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 SLC26A5P58743 744 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 PCBP2Q15366 365 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDAC1-209ENST00000484305 ABHD17BQ5VST6 288 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 FCRLBQ6BAA4 426 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 GRHL2Q6ISB3 625 aa12.1□□□□□ -0.47
HDAC1-209ENST00000484305 MED27Q6P2C8 311 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms